Etheostoma spectabile (orangethroat darter): 116679300
Help
Entry
116679300 CDS
T08457
Name
(RefSeq) interferon regulatory factor 5-like
KO
K09446
interferon regulatory factor 5
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116679300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116679300
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116679300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
116679300
NCBI-ProteinID:
XP_032364866
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MSVQPRRIRLKPWLLTQVNSGRYPGLQWISPDHRLFQIPWKHATRHTPAAAEEEHTIFKA
WAVETGKYQDGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVQPYKVYEVCDQGGN
ADAADDDDEEMPNLMELSLNPRPSDPPLFSCGPHADVRPFRLSSDGTFSPVTPGLPMTPD
VQVQCEGGCGQSFVSLPPPAESAPPCPAPMEASSIHDVHNQTHCKYDLLSSVPLTDLELK
FQYRGRPMGSLTVSNPQGCRLFFGLLEPTPDQVDLLGPVSLQQVRFPGTGELQSHKQKFY
TDALLDAMERGLILELCQQDLYAMRLCQCKVFWSGPGVPPHAGPNPLEREKRIKVFSLND
FLQGLILFHRGEAAAPPPFDLFFCFGEDWPDNKPREKKLIIVQVVPVVARILTEMFSGEL
SWSTDSIRLQISNPDVKDQTVEQFKELQRLLQNQHIQGPWAAAGP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcagccccggaggatccggctgaaaccttggctgctgacccaggtgaacagc
ggcaggtacccgggtctgcagtggatcagtccagaccaccgactcttccagatcccttgg
aaacacgctacccgccacacgccagccgctgcagaagaggaacacaccatcttcaaggcg
tgggctgtggagacagggaagtaccaggacggcgtggacgagcccgaccccgccaagtgg
aaagcgaacctccgctgcgctctgaacaaaagtcgagagtttcagctgaaatacgacgga
accaaggagaccccggtccagccctacaaggtgtacgaggtctgcgatcagggcgggaat
gcagacgcagcggatgatgatgacgaggagatgcccaatctgatggagctctccctcaac
ccgcggcccagcgacccccccctcttcagctgtgggccccacgcagacgtccgtcccttc
aggctgtcctccgacgggacgtttagtcccgtgacccccggcctccccatgacccctgac
gtccaggttcagtgtgagggggggtgtgggcagagctttgtctctctgccccccccggct
gagtccgcccccccttgccctgcccccatggaggccagcagcatacacgacgtccataac
cagacgcactgcaagtacgacctgctcagcagcgtcccgctaacggacttggagcttaag
ttccagtaccgcggccggcccatgggttccctgaccgtcagtaacccccagggctgccgg
ctgttcttcgggctgctggagcccaccccggaccaggtggacctgctgggccccgtcagc
ctgcagcaggttcgattccccggcaccggtgagctgcagagccacaagcagaagttctac
acggacgccctgctggacgccatggagcgcggcctcatcctggagctgtgtcagcaggac
ctgtatgccatgcgcctctgccagtgcaaggtgttctggtccgggccgggggtgcccccc
cacgccggccccaaccccctggagcgggagaagaggatcaaagtgttcagcctcaacgac
ttcctgcaagggctgatcctgttccaccggggggaggcggccgcccccccgccctttgac
ctgttcttctgcttcggggaggactggcccgacaacaagcccagagagaagaagctcatc
atcgtgcaggtggtaccggtggtggcccggatcctgacggagatgttctctggggagctg
agctggtccaccgacagcatccggctccagatctcaaacccggacgtcaaggaccagacg
gtggagcagttcaaggagctgcagaggctgctgcagaaccagcacatccaaggcccctgg
gctgctgccgggccctga
DBGET
integrated database retrieval system
