KEGG   Etheostoma spectabile (orangethroat darter): 116679366
Entry
116679366         CDS       T08457                                 
Name
(RefSeq) LOW QUALITY PROTEIN: mamu class II histocompatibility antigen, DR alpha chain-like
  KO
K06752  MHC class II antigen
Organism
esp  Etheostoma spectabile (orangethroat darter)
Pathway
esp04145  Phagosome
esp04514  Cell adhesion molecules
esp04672  Intestinal immune network for IgA production
esp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:esp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116679366
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116679366
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    116679366
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    116679366
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:esp04147]
    116679366
Exosome [BR:esp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116679366
  Exosomal proteins of epithelial cells
   116679366
  Exosomal proteins of breast milk
   116679366
SSDB
Motif
Pfam: C1-set MHC_II_alpha C2-set_2 Ig_3 C2-set_3
Other DBs
NCBI-GeneID: 116679366
NCBI-ProteinID: XP_032364922
LinkDB
Position
Unknown
AA seq 235 aa
MKMMMVLVLSGLFCVSAAVLHEDLYISGCSDSDGENMYGLEGEELWYADFIHQRGVEPQP
SFIDHLTYQGAYEQAVAXQQICRANLKNVRKGMKDLPVEHDPPSSPMVYTKEDLVLGVKN
DLICYVTGFYPAPVVFSWTRNGDNVTTATSTNVPYPNKDGSFNQFSRLEFTPQPGDLYSC
TVHHVALDRPLTRIWDVEKTGPGVGPAVFCGLGLTVGLLGVAAGTFFLIKGNECS
NT seq 708 nt   +upstreamnt  +downstreamnt
atgaagatgatgatggtcctcgtcctctccggtctcttctgtgtctcagctgccgttcta
catgaggacctttatatctccggctgttcagactctgatggagagaacatgtatggtctg
gaaggagaagagctctggtacgcagacttcatccaccagagaggagtggagcctcagccc
agcttcatagatcatctcacctaccaaggagcttatgaacaagctgtggctnatcaacag
atctgcagagccaacctgaagaatgtccgtaaaggcatgaaggacctccctgtggagcac
gatcctccttccagtcccatggtctacaccaaagaggacctggtcctgggagtgaagaac
gacctcatctgctacgtgactggtttctatccggctccggtggtcttctcctggacccgg
aacggggacaacgtcaccacggcaaccagcaccaacgtcccctaccccaacaaagacggc
tccttcaaccagttctccagactggagttcaccccccagccgggagacctctacagctgt
acagtccaccatgtggccctggaccggcccctgaccaggatctgggatgtggagaagacg
gggcccggtgttggacctgcggtcttctgtggactgggtctgacggtgggtctgctgggc
gtggctgctggaaccttcttcctcatcaaaggaaacgagtgcagctga

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