Etheostoma spectabile (orangethroat darter): 116682665
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Entry
116682665 CDS
T08457
Symbol
trpc6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116682665 (trpc6)
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116682665 (trpc6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_4
Ank
Cmr1_C
DUF5455
Motif
Other DBs
NCBI-GeneID:
116682665
NCBI-ProteinID:
XP_032365636
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Position
3:16441364..16452233
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AA seq
823 aa
AA seq
DB search
MMQRQQAVVKPRRQALRGAGYLYHAQPSSCLSLTEELFLEAAEYGNIPEIRRMLEELPDL
NVNCVNYMGQNALQLAVANEHFEVTKLLLRKKELSRIGDALLLAISKGYIRIVEAILSYP
AFADAQRLTNSPSQADTNDDFFAYDEDGTRFSHDITPIILASQCHEFEIVHILLMKGARV
ERPHDYFCQCRACSEQQRHDSFSHSQSRINAYKCLASPAYLSLSNEDPVMAALELSNELA
VLANIEKEFKNDYTKLSMQCKDFVVGLLDLCQNTEEVKAILNGDTESSQRSETVGRQNLI
RLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTTAVKLLLVLGVALGLPVLSLMY
WIAPSSKIGKLMCGPFLKFVAHAASFMIFLCLLVLNAADRFEGTSLLPNMTIHDHPSQLF
RMKTTTFTWMEILIISWVIGHKWKIWEECRDIWSQDIREYISEPWNLLDFSILTIFMTSF
IARLMAFWHAYSAQCYVDKHYTDLSNTTLPFEIQYFQLARINWVPSDPQLISEGLYAIAV
VLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFITVFVAFMVGMFTLYSHYLGAK
HNDAFTTLEESFKTLFWAIFGLSEVKSVVINIDHKFIENTGYVLYGVYNIIMVIVLLNML
IAMFNSSFQEIEDDADVEWKFARAKLWFSYFEHGGTLPVPFNLVPSPRAVVSLLLGIRRF
LWDVLKGKSKENANDEPELNKLRQQEDLSVEGSLCRHQDTMNRLIKRYILKAQRDKDNDE
IKEGELKEIKQDISGLRYELLERANHDMETLAQLIRQLGENHV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcggcagcaggctgtagtcaaacccaggagacaagcgctacggggagccggt
tacctgtaccatgctcaaccctcctcctgcctttccctgacagaggaactcttcttagaa
gctgcagaatatggcaacattccagaaatcaggcggatgctggaggagctgccagacctt
aacgtcaactgtgtgaattatatgggccagaatgcactgcagctggcagttgccaatgag
cactttgaggtaacaaagctcctacttaggaagaaagagctctctagaataggagacgca
ttgcttttagccatcagtaagggctacatccgtatagtggaggccatactgagctatccg
gcctttgcagatgctcagaggctgactaacagtcccagccaggcggacacaaacgacgac
ttcttcgcctatgacgaggacggcacacgtttctctcacgacatcactcccatcatcctg
gcctctcagtgccatgagtttgaaatcgttcatatactgcttatgaagggggcccgtgta
gagcggccccatgactacttctgccagtgcagggcctgcagcgagcagcagaggcatgac
tcattcagccattcacaatctcgcatcaatgcatacaaatgtctggccagtccagcgtat
ctgtccctgtccaatgaagacccagtgatggcggctctggagctgagcaatgagctggca
gttctggccaacattgagaaggagttcaagaatgattacacaaaactgtccatgcagtgt
aaagactttgtggtgggactcctggatctgtgtcaaaacacagaggaagtgaaggccatc
ttaaatggggacaccgagtccagtcaaaggtctgagaccgtcggcagacaaaacctcatc
aggttaaaacttgcaataaaatatgaagttaaaaagtttgtggcacatccaaactgccaa
cagcaactcctctccatctggtatgagaacttgtcaggactccgtcagcagaccacagca
gttaaactcctcctagtccttggtgttgcccttgggttgcctgtcctgtccctcatgtac
tggatagcaccgtcaagtaagatagggaaactcatgtgtggaccgttcctgaagtttgtg
gcccatgcagcgtcctttatgatatttctatgcctgctggtcctgaacgcagcagaccgc
tttgagggaacgtcgctgctgccaaacatgaccatccacgatcacccctcccaactgttt
cgtatgaagaccaccaccttcacctggatggagattctcatcatatcctgggtcataggt
cataagtggaagatctgggaagaatgtagagatatttggtcgcaggacatccgggaatac
atctcagaaccctggaaccttctggactttagtattttgaccattttcatgacttctttc
attgccagattaatggctttctggcatgcatattctgcccagtgttacgttgacaagcac
tacacggacctgtccaacacgaccttgccttttgagatacagtatttccagctggctcga
atcaactgggttccctcagacccgcagctcatttctgaaggcctgtatgccatcgcagtc
gtgctgagtttctctcgcattgcctacatccttcctgccaacgagagcttcggccctttg
cagatctctctgggaagaaccgttaaagacatctttaagttcatggtgattttcatcact
gtattcgtggctttcatggtgggaatgttcactctgtactcgcactacctcggagccaag
cacaacgacgccttcacaacactcgaagagagtttcaaaacgttattctgggccatcttt
ggcttgtcagaagtgaaatcagtggtcattaacatcgaccataagttcattgagaatacc
ggctatgttctgtacggggtgtacaacatcatcatggtgattgtcctgctgaatatgctc
attgccatgttcaacagctccttccaagaaattgaggatgatgctgatgtggagtggaag
tttgccagagctaagctctggttctcgtactttgagcatggcggcacgctgcctgtgccc
ttcaacctcgtccccagccccagggctgtggtgtccctcttgctggggataaggagattt
ctctgggatgtacttaaaggcaaaagcaaagaaaatgcaaatgatgagccggagcttaac
aagttgaggcaacaggaagatctgagtgtggaaggatcgctttgtcgtcaccaagataca
atgaatcgcctcatcaagagatacatcttaaaagcacagagagataaagacaacgatgaa
atcaaagaaggtgaactgaaggagatcaaacaggacatctccggtctccggtacgagctg
ctggaaagggccaaccacgacatggagaccctggcacagctcatcaggcaactgggagaa
aatcatgtttag
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