Etheostoma spectabile (orangethroat darter): 116687057
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Entry
116687057 CDS
T08457
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04530
Tight junction
esp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116687057
09142 Cell motility
04810 Regulation of actin cytoskeleton
116687057
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116687057
Domain-containing proteins not elsewhere classified [BR:
esp04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
116687057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116687057
NCBI-ProteinID:
XP_032368035
LinkDB
All DBs
Position
3:15043684..15111675
Genome browser
AA seq
1572 aa
AA seq
DB search
MGNVESQNGDQALYGNEHGYLSRKHVSRSLRISNKQSRRSRHASSGKIEHRNSETSTRSS
STPSIPQSLADHGLEPFNETDILPDFGSPIWVDRVAMNLRPVSFHNDLANPSVHMNTMHL
TLPGPTAEEVQDEDVYTGEVTYLQKTRDGSKETVNFKKKRSKSADMWRNDSLEFSLSDLS
QEHLTSTEEIIDTANERDFIDCKGHLQSSPSDSADRANSLDELYSQKIPARRQPHGRYAK
WHDANRAIGEHEDDKMLSPSEEDGNTYSAYTLPCRRSHCLSEGLSSHQAAMCASMQGRRA
QTIQDVTAGEGSEYEDSGIDGVTVEANHQSRRYKTMSASFSVCSAAGRSMFAGSDSGSSS
GGGASECVQGVYENFRQELERSSCQTESLEEAGSALSDEQSTMSSAYQSDPLLSVAQGMV
RKAGRLAVKNFLVHKKNKKVESATRRKWKSYWVSLKGCTLFFYETDGRSGIDNTSIPKHA
IWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTCSQTELENWITAIHSACAAAVARHH
HREDTVRLLRAEIKKLEQKIDMDEKMKKMGDMQLSAVTDTKKRKTILDQIFLWEQNLEQF
HMDLFRFRCYLASLQGGELPNPKRLLAVASRPTKLAMGRLGIFSVSSFHALVAARTENGV
RRRTQAMSRSCSKRKSRFSSLWGLDTTSKKKTKAHPSINQQVFADGREPVKKPVDGIHVD
LAKEHTKSEEGCVKSLPRPSTESDIWVPDHLTPSWVCLPNDQPVLTIIQPGESALCVLET
LCKAHQLDPTKHYLRLKFLIENQVQLYIPKPEEDVCDLLYKEIELCSKITKVMQFDRDES
CMIGYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLNAGDEILQLNGKDSHGLNFSDMKA
AFSQASLALTVNTLPSVERRQLCYLPPRRSDAEEDLYTDIFSQSQEEILDDGVGLLLESS
GDSLDDDSEIFSEFECRKSTEQVAAFCRSLHDMNPTECVSSSPSPDSPFPPPSTLRQLSD
ADKLRKVICELVETERTYVKDLNCLIGRYLTPLQKETFLTQDELDVLFGNLPEMVEFQVE
FLKTLEDGTRLVPDLEKLERVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLV
KAKTDHEFKAFLDDRNPKQQHSSTLESYLIKPIQRVLKYPLLLKELYALTDPDSEEHYHL
DVAMKAMNKVASHINEMQKIHEEFGAVFDLLITEQSGEKKEVADLSMGDLLLHTSVTWIN
PPASLGKGKKEPQIATFVFKTAVVFVCKDGSKQKKKMGGSHRVSMSSEEKDPFRFRHMIP
TDALQVRSLGNADGEGSAVCEIVHIKSESEGRPERTFQLCCSSPESRKDFLKTVHSILRE
KHRRQLLKTESLPLNQQYVPFGGKRLCALKGARPAINRAASAPTRTLGRRKLVRNRFTID
TDIVFDGEPEQDLASPQEPKSDRLQQDNKPDEPPPQSELAGDTDRWVEEQFDLEEYEDPE
EVKETDILSDEDDEFYQKPRALAAEADLEAPVMALSLESEETEESGTPDDVKQSAVINEK
QREKDEIWVRRQ
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgtcgagagccagaatggggaccaagccctctacggtaacgaacatggctat
ttgtcacgtaagcacgtgtctcggtctcttcgcatctccaacaagcagtccagacgctct
cgacatgcttcatcagggaaaatagagcacaggaactctgagacgagcacacgctcaagt
agcacccccagtatcccacaatccctggctgaccatggactggagcctttcaatgagaca
gatatcctcccagacttcggaagccccatttgggtggaccgtgtggccatgaacctgcgg
cctgtgtcctttcacaacgacctcgccaatccgtccgtgcacatgaatacgatgcaccta
acccttcctggccccactgcagaggaggtgcaggacgaagatgtgtacacgggcgaggta
acatacctccagaaaactcgggacggctccaaggagaccgtcaacttcaagaagaaaagg
tctaagtctgctgacatgtggcgaaatgacagcctggagttctccctgtctgaccttagc
caggagcacctgaccagcacagaggagatcatagacacggccaacgagagggacttcatt
gactgcaaaggacacctgcagtccagcccctcagactccgctgacagggccaactccctg
gacgagctgtatagccagaagatccccgcccgccggcaaccccacggccgctatgccaag
tggcacgacgccaacagggctatcggggagcacgaagacgataagatgctctccccatca
gaggaggatggtaacacctacagtgcatacaccctcccctgccggcgctcccactgcctg
tccgagggcctgagcagccaccaagctgccatgtgtgccagtatgcagggcaggagggcg
cagactatacaggatgtcacagctggggagggcagcgagtacgaggacagtggcatcgat
ggggtgactgtggaggccaatcaccagtctcgacgctacaagaccatgtcggcctcattc
tccgtgtgctcggcagccggcaggagcatgtttgccggcagcgacagcggcagcagcagt
ggcggcggagccagcgagtgtgtacagggcgtgtatgagaactttcgccaagaactggaa
aggagctcctgccagacggagagcttggaggaggcggggtcagccctgagtgacgagcag
agcaccatgagctccgcctaccagtcggacccattgctcagtgttgcccaggggatggtg
cgcaaagctggcaggcttgccgtcaagaacttcctcgtacataagaagaacaagaaagtg
gagtcagccacaaggcgcaagtggaagagttactgggtttccctgaaaggttgcactctg
ttcttctatgagactgatggccgttcagggatcgacaacaccagtattcccaagcatgct
atctgggtagagaacagtattgtccaggcggtaccagagcatcccaaaaaggactttgtg
ttttgtctcagcaactccctgggagatgcttttctctttcagacctgcagccagacagag
ctggagaactggatcacagccatccactcggcatgtgccgctgccgttgcccgccaccac
cacagagaggacacggtgcgcctgcttcgcgcagagatcaagaagctggagcagaagatt
gacatggacgagaagatgaagaagatgggtgacatgcagctttctgctgttactgacacc
aagaagaggaagacgatcctggatcaaatcttcctgtgggagcagaacctggagcagttt
cacatggatctattccgcttcaggtgctacctggccagcctgcagggaggagagctgccc
aaccccaaacgcctcctggctgttgcctctcgccccaccaagcttgcaatgggccggctg
ggtatattctctgtctcttccttccatgcactggtggcagctcgcacagagaacggagtg
agacggcgaacacaggccatgtctcgttcctgcagcaagcgcaagagcaggttctcttcc
ctttggggtctggacactacctcaaagaaaaaaacaaaagcccatcccagtatcaaccag
caggtctttgctgatggcagagagccagtgaaaaagcctgtagatggcatacatgttgat
cttgcaaaggaacacacaaaaagtgaggaaggatgtgtgaaaagccttccacggcccagc
acggaaagtgacatctgggtccctgaccacctcaccccctcctgggtgtgtctgccaaac
gaccagccggtgctaaccatcatccagccaggggagtcagcactgtgcgttctggaaact
ctctgcaaggctcaccagctggatcccaccaagcactacttgcgtctcaaattccttatc
gaaaaccaagtgcaattatacattcccaaaccagaagaggatgtgtgcgacttgctttac
aaagaaattgagctgtgctccaaaattacaaaagtaatgcagtttgacagagatgaatcc
tgcatgattggttacggtttctccatttctgtggtggaggaggatggagtacagcagctc
tacatcacggatgtgaaggcgggcggattagccttcgccaaaggtctgaatgcaggggat
gaaatacttcagctgaacggaaaagactctcacggtctcaacttctcagacatgaaggcg
gctttctctcaagcttcgctggctttgacagtcaacaccctgccctccgtggaacgccgg
cagctctgctacctgccgccacgccgctctgatgcagaggaagatctctacacggacatc
ttctcccagagtcaagaggagatcctggacgacggagtgggactgttgctggagagctca
ggagacagcctggacgacgactctgagatcttcagcgagtttgagtgcagaaagagtacg
gagcaggtcgctgctttctgccgcagtctccatgacatgaatcccaccgagtgtgtgtcc
tcttcgcctagcccggactcgccgtttccccctccctcaactctccgacagctctctgat
gccgacaagctccgcaaagtcatctgtgaacttgtggagaccgaacgcacctatgtcaaa
gatcttaattgcctcatcgggaggtatttaaccccactgcagaaagagaccttcctcacg
caggatgagctcgatgtactgtttgggaacttgccggaaatggtggagttccaggttgag
tttctcaagaccctggaagatgggactagattggttccagatctagagaaattggagaga
gtggatcagtttaagaaaatcctcttctccctgggaggctcgttcctgtactatgcagac
cgttttaaaatctacagtgctttctgcgccagccacaccaaagttcctaaggtccttgta
aaggccaaaaccgatcatgaattcaaggccttcctggatgaccgcaaccccaagcagcag
cactcgtccacccttgagtcatatctgatcaaacccatccaaagggtgctgaagtatccc
ctgctgctgaaggagctctacgcgctcacagaccccgacagtgaggagcattaccacctg
gatgttgccatgaaagccatgaacaaagttgccagccacattaatgaaatgcagaagatc
cacgaggagtttggggcagtgttcgatctgcttatcactgagcagagtggtgaaaagaaa
gaggtggctgatctgtccatgggtgacctgctcctccacaccagtgtgacctggatcaac
ccccctgcctccttgggaaaagggaagaaagagccccagatagctacgtttgtgttcaaa
acagcagtggtctttgtatgcaaggatggatccaagcagaagaagaaaatgggtggctcc
catcgtgtctctatgtcgtctgaagaaaaagaccccttccgattccgtcatatgatccca
actgacgcacttcaagtcagatctttgggcaacgcagatggcgagggctcggctgtgtgt
gaaattgtccacataaagtcggagtcggagggaaggccagagaggacattccagctgtgc
tgtagttccccagagagtagaaaggactttctgaaaacagtccattccatcttgagggaa
aagcaccgccggcaactcctaaaaacggagagtttacccctcaaccagcagtatgtgccc
tttggaggaaagcgcctctgtgccctgaagggagcccgtcctgccataaatagagcagca
tctgcaccaaccagaactctaggcagaaggaagttagtgcgcaaccgtttcaccatagac
accgacattgtttttgatggcgagcctgaacaggaccttgcttcacctcaggagcccaag
tcagatcggctgcagcaggacaacaaaccagatgagccgccgccgcagtccgagttagca
ggggacacagaccgctgggtggaagaacagttcgacctagaagaatacgaggacccggaa
gaggtgaaggagacagacattcttagtgatgaggatgacgagttctaccaaaaacccaga
gcgctggccgctgaggctgacctggaggcccccgtcatggctttgtccttggagagtgag
gaaactgaggagagcgggacacctgatgatgtgaagcagagtgccgtgatcaatgaaaag
caaagggagaaggatgaaatttgggtaagaaggcagtga
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integrated database retrieval system
