Etheostoma spectabile (orangethroat darter): 116690933
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Entry
116690933 CDS
T08457
Symbol
fgb
Name
(RefSeq) LOW QUALITY PROTEIN: fibrinogen beta chain
KO
K03904
fibrinogen beta chain
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04517
IgSF CAM signaling
esp04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116690933 (fgb)
04518 Integrin signaling
116690933 (fgb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116690933 (fgb)
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116690933 (fgb)
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
116690933 (fgb)
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116690933 (fgb)
Hyaluronan
Extracellular matrix or blood plasma proteins
116690933 (fgb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
Rv2743c
RUNDC1
FapA
CCDC18_2nd
STX6_10_61_N
ApoB100_arm_9ins
CCDC146_CC_N
ADIP
IFT57
Dynein_C
Motif
Other DBs
NCBI-GeneID:
116690933
NCBI-ProteinID:
XP_032374051
LinkDB
All DBs
Position
6:complement(30349513..30393605)
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AA seq
634 aa
AA seq
DB search
MRTMRTLLLLCLCVSAVWTQDYDDYDDDGKTAKTATVAPATVDARGHRPLARDRDTYTPK
RVVPPPIGGGGARYRGRPTPAPARGQQRQEKEKQPDEGGCTHAAEEMGVLCPSGCELKTT
LLKQERNVKTSINELKPQVEDLSRSSNTVHTYVNSISNSLRERQRLVTDNSRVVSQYTDL
VEEQHAYIKETVDTVFPSNIRVLQGVLDKIRLKIQKLEKAIQGQREECKEPCRTKCPIPV
VSGKECEEIYRRGGRDSQMYLVQPDAFYPPYKVFCDXXXXXXXXXNSTKNGGWLLIQNRL
DGSVDFGRRWDEYRRGFGNIAFDAGKGHCETPGEYWLGNDRISQVTKMGPTEVLIEMEDW
TGAKVHAQYRQFTVQSETSNYVLAVDGYSGNAGNGFLEGSTELFGVNRTMTIHNGMMFST
YDRDNDNWIPGDPSKQCAREDGGGWWYNRCHSANPNGRYYVGGAYTRKMAKHGTDDGVVW
MNWKGSWYSLKAVSMKIRLRRLASVVPPPDAVAPAQLPPHRSLSRSKVGTHPSWDGPERR
RRPMCTGHVQRNVRLGDPDRAVLCAGHAPLPVLQLSTLSCSPPDRQQVEVAVAQPESPRP
AASTEPNPSRYWTQCGLKHERAAPLCCANQPPAH
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgatgaggacgctgctgttgctgtgtctgtgtgtgtccgccgtctggactcag
gactatgacgactatgacgacgacggcaagacagcgaagactgcgacggtagccccggcg
accgtagatgctcgcggtcaccgtcccctagcccgggacagggacacctacaccccaaaa
cgtgtggttccgccccctatcggcggcggcggcgccaggtatcgcggccgtccgacaccg
gctccagccagaggacagcagcggcaggagaaggagaagcagccggacgaaggaggatgc
acccacgccgcagaggagatgggcgtcttgtgtcccagcggctgtgagctgaagaccacg
ctgctgaagcaagagaggaacgtcaagacgagcatcaatgaactcaagccccaggtggag
gacttgtcccgatcctccaacaccgtccacacctacgtcaacagcatttccaactctctg
agggagcggcagagactcgtcaccgacaacagccgggtggtcagtcagtacaccgatcta
gtggaggaacaacatgcctacattaaggagacggtggacacggtcttcccctccaacatc
agggtgctacagggggtcctcgacaagatcaggctgaagatccagaagctggagaaggcc
atccagggtcagagggaagagtgcaaggaaccgtgcaggaccaagtgtcccataccggtg
gtgtctggtaaggagtgtgaggagatctaccgtcgcggaggaagagactcccagatgtac
ctggtccagcctgatgccttctaccccccctacaaggtcttctgtgaccannnnnnnnnn
nnnnnnnnnnnnnnnaattccaccaagaacggaggatggcttctcatccagaacaggctc
gatggcagtgtcgatttcggacgacgctgggacgaatatcgacgcggtttcggcaacatc
gcctttgacgctggaaagggacactgtgagactcctggtgagtactggctgggcaatgac
cgcattagccaggtgacgaagatgggccccactgaggtcctcattgagatggaggactgg
acaggtgccaaggtccacgcccagtaccggcagttcaccgtccaatcagagacgtccaac
tacgtgctggcggtcgacggttactccggtaacgccggcaacggtttcctggagggctcc
accgagctgttcggcgtgaaccgcacgatgaccatccacaacggcatgatgttcagcacc
tacgacagggacaacgacaactggatccccggcgacccgtccaagcagtgcgccagggag
gacggcggcggctggtggtacaaccgctgccactcggccaatcccaacggccgatactac
gtgggcggggcctacacgcgcaagatggccaagcacggcacggacgacggcgtggtgtgg
atgaactggaagggcagctggtactccctcaaggccgtcagcatgaagatcagacttcgc
cgtctggcatcggttgtaccaccacccgacgccgtggcgccggcgcagctccccccccac
aggtcgctatcccggtcaaaggtcggaactcatccctcgtgggacgggccagagcgtcgc
cggcgtccaatgtgtaccggacacgtgcagcggaacgtccgcctcggcgaccctgaccgc
gctgtactctgcgccggccacgcccctctcccagtcctccagctctccaccctcagctgc
tctccccctgaccgtcagcaggtggaggttgcggttgcccagccagaatccccgcggccg
gcggcgtcgaccgagccgaacccgtcgcggtactggacccagtgcggtttgaagcacgag
cgcgccgctcccctctgctgcgctaaccaaccacccgcccattag
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