Etheostoma spectabile (orangethroat darter): 116691264
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Entry
116691264 CDS
T08457
Symbol
tnfrsf1a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A isoform X1
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04010
MAPK signaling pathway
esp04060
Cytokine-cytokine receptor interaction
esp04150
mTOR signaling pathway
esp04210
Apoptosis
esp04217
Necroptosis
esp04920
Adipocytokine signaling pathway
esp05132
Salmonella infection
esp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116691264 (tnfrsf1a)
04150 mTOR signaling pathway
116691264 (tnfrsf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116691264 (tnfrsf1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116691264 (tnfrsf1a)
04217 Necroptosis
116691264 (tnfrsf1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
116691264 (tnfrsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116691264 (tnfrsf1a)
09171 Infectious disease: bacterial
05132 Salmonella infection
116691264 (tnfrsf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
esp04050
]
116691264 (tnfrsf1a)
04090 CD molecules [BR:
esp04090
]
116691264 (tnfrsf1a)
Cytokine receptors [BR:
esp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
116691264 (tnfrsf1a)
CD molecules [BR:
esp04090
]
Proteins
116691264 (tnfrsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
DctM
Motif
Other DBs
NCBI-GeneID:
116691264
NCBI-ProteinID:
XP_032374646
LinkDB
All DBs
Position
6:11302175..11309705
Genome browser
AA seq
393 aa
AA seq
DB search
MEGAWHRRRWDIKTPFSTILLLMCMFSPTLTLLQPSEEQMCPHGDYLSEKGICCNKCAPG
FKLVEECHALGQRSNCTKCPDDQYTDELNHSRNCRSCRRCKAGRHDEVVSECQSDKNTIC
RCKFGFYKFIIDSETYDCRRCSECGQDEKKTHTCTPEKNTVCECKEGYNRVKGKCVPCKN
CTAELTPPTWATIDFYEVPETGNGYLIIAGVAVMAVMLLVLLVLVTYIVTKWSTKNKLLK
PFCQPSDVSVDSCERALFHIEEPSENGSVKAVPQSPVSEQEPYNLPDCVPLEVKIPDLIY
TVLDLVPVLQVKQLVRSLGVKDTEIEQAELDHRSCREAHYQMLRVWAERGSRAGGGGRGR
MLHSPLLQELLEELRKMHLGRAAEELETKYGIQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcttggcatagaagaagatgggacataaaaacaccttttagcacaatactg
ctccttatgtgcatgttcagccctactctgacattgttacaaccgtcagaggagcagatg
tgtccacatggtgactatctcagtgaaaagggaatttgttgcaacaaatgcgctccaggt
tttaagcttgtagaagagtgtcatgctctgggtcagagaagtaactgcacaaaatgtcct
gatgaccaatacacagacgagctgaaccattcccgcaactgcagaagttgcagacgctgc
aaagcgggaaggcatgacgaagtggtatcagaatgtcaatcagacaaaaacacgatttgt
agatgtaagttcggtttttacaagttcatcattgactcagaaacatacgactgtcggaga
tgttcagagtgtggacaggatgaaaagaaaacacatacatgtacaccagagaaaaacact
gtgtgtgaatgtaaagagggctacaacagagtcaagggcaagtgtgtgccctgcaagaat
tgtacggctgagttaacacctcctacttgggctacaatagatttttatgaagtacctgag
actggaaatggatatcttataattgctggagttgcagttatggctgtgatgttgctggtg
ctgttggttctcgtcacctatattgttacaaaatggtctaccaaaaataagttgctgaaa
ccattctgtcaaccatctgacgtctctgtggactcatgtgagcgagccctgttccacatc
gaggaaccttcagagaacgggagtgtcaaggctgttccccaaagtcctgtgagtgagcag
gagccatacaatctgcctgactgtgtccccctggaagtcaagatccctgacctgatctac
acggtgctggatctggttcctgtgctacaggtaaagcaactggtgcgttctcttggtgtg
aaggatacagaaatcgaacaagcagagttggatcaccgatcctgccgcgaggctcactac
cagatgctgagagtgtgggctgagagagggtcacgtgcaggtggaggaggacgaggaaga
atgctgcactcgcccttgttgcaagagttgttggaggaactgagaaagatgcacctggga
cgggcagccgaggagctggagacaaagtacggcattcagtag
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