Etheostoma spectabile (orangethroat darter): 116692431
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Entry
116692431 CDS
T08457
Symbol
pkp1
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
esp04812
]
116692431 (pkp1)
Cytoskeleton proteins [BR:
esp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
116692431 (pkp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
Arm_2
Cnd1
Atx10homo_assoc
HEAT
DUF2615
Motif
Other DBs
NCBI-GeneID:
116692431
NCBI-ProteinID:
XP_032376616
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Position
7:9003311..9019259
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AA seq
717 aa
AA seq
DB search
MMAPEPLRSATTSKGREDTSLALPSDNKLHSGQQRVLHQVHTIERSKSKHGKSGSPSLSR
TSLPPQTLTTYEFGSFKFSPSKANGFFSRTNSTLSTGYNKSVNTRSSRTLSARTSRGRQV
SSGIWDQQMNTSSWPKATNGLRSARSDPALAHPFSATTMRGKGMLAQGEQSLQSRINRNS
TYSVTDGTQMTNSQTRIVRPPSALYRTEGKMGTIKTSNIEQQAAANSAMNMSDMTLKEAV
EFLSHPEENYQQCGATFIHHTTFKEEGAKQEVFHLEGILALVTLLRSPNPGVSQAAAGAL
RNLVFKDQDNKLVVQRCGGIAKALQLLKETDSTETQKQITGLLWNLSSADELKAELIATA
LPALTENVVVPFTCWSDNSANNNIHPDVFNSATGCLRNLSCGQKKERQAMRECRGLVDSL
MGYVQSCVAEENPDDKSVENCACILHNLTYQLKEESPECFNKFQLEREGQHGRSKSPTIG
CFSPKSSKAQKEFLFDAVRGLPEDSKPSGVKWLCHPLAMQTYLSLLGSSQNGATLEACCG
ALQNLTAGKGPGSSAMSQILVQKLGALLHMPRLLKSPNRSLQKTAMSLLGNMSRTSSLQT
TMAKQILPELTSLLSSGPREMGNSDETIATACSSLRSLMLADTEVSKKFVKSELVSSVAD
LSENGSFPKGSKAASLLLYSLWNDKNLQGIAKKLGMAKSLFVNDNTTAIHRSMQVIE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccggagccgctgcgttcagcgacgactagcaaaggcagggaggacacgtcg
ctcgccttgccctccgacaacaagctgcactcgggacagcagcgcgtgctccatcaagtc
cacacgatcgagaggagcaagtccaaacacgggaagagcggctcgccatcactctcacga
acaagcctgcccccccagactttgacaacatatgagtttgggtcgttcaagttttctcca
tccaaagcaaatggcttcttcagtcgtaccaactccactctgtcaacaggctacaacaaa
tcggtcaatactcgtagtagtcgtaccctatccgctagaacctcaagaggaagacaagtc
agctcaggcatatgggatcagcaaatgaacacttccagctggcccaaggccaccaatggg
ctgagatctgctcgcagtgacccggccttggctcatccattttctgcaaccactatgcga
ggaaaagggatgttggctcagggcgagcagagccttcagagtcggataaatagaaacagc
acctattctgtgactgacggcacacaaatgaccaacagccagacgcgtatcgtccggccg
ccctctgccctgtatcgcactgagggcaaaatgggcaccatcaaaacatccaacatagag
cagcaagcagcggcgaacagtgcgatgaacatgtcagacatgaccctaaaggaggctgta
gagttcctgtctcaccctgaagagaattaccagcagtgcggcgccaccttcatccaccac
accaccttcaaagaggagggcgccaaacaggaggttttccatctggaaggtatccttgct
ctggtgacgctgctgcggagccccaatcctggggtgagccaggctgctgctggggctctg
agaaacctggtattcaaagaccaggacaacaagctggtggttcagcgctgtggcggtata
gccaaggccctgcagctactaaaggagacagattctactgagacccagaaacaaatcact
ggccttctatggaacctgtcctctgccgatgaactgaaggcagaacttatagctacagca
ctgccagcactgactgagaatgtggtggtgccattcacctgctggtcagacaacagcgcc
aacaacaacatacaccccgatgtcttcaacagcgccacagggtgcctgcggaacctgagc
tgcggccaaaagaaggagaggcaggcaatgagagagtgccgtggcctcgttgactccctc
atgggttatgtccagtcctgcgtggcagaggaaaaccctgatgacaagtctgtggagaac
tgtgcatgcatcctccataacttgacctaccaactgaaggaagagtctcctgagtgcttc
aacaagttccaacttgagagagagggccaacatgggagaagcaaaagccccacgattgga
tgcttcagccccaagagcagcaaggctcagaaggagtttttatttgatgcggtgcgggga
ctgccagaggacagcaagccatcaggtgtgaagtggttgtgccatcccttagccatgcag
acctacctgtctctgctgggctcgtcccagaatggtgccacactggaagcctgctgtggt
gccctgcagaacctcactgccggcaagggaccggggtccagtgccatgtctcagattctg
gttcaaaagctgggggctctgctgcacatgccccgtcttttaaagtctcctaaccggagc
ctgcagaagactgccatgtcccttctgggtaacatgtctcgaaccagcagtttgcagact
accatggcaaagcagattctgcctgagctcaccagcctcctttcctctggccctcgagag
atgggaaactctgacgaaacaatagcaacagcatgcagctcattgcggagtctgatgttg
gcagacactgaggtcagcaagaagttcgtcaaaagtgaactggtgtcatcagtggctgac
ctcagcgagaacggctctttccccaaaggcagcaaagcagcttccttgctcctctacagc
ttatggaacgataagaatttgcaaggcatagcgaaaaagctggggatggccaaatcactt
tttgtcaatgacaacaccacagctattcacaggtcgatgcaggttatcgagtga
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