Etheostoma spectabile (orangethroat darter): 116692578
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Entry
116692578 CDS
T08457
Symbol
plxnd1
Name
(RefSeq) plexin-D1 isoform X1
KO
K06822
plexin D
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
116692578 (plxnd1)
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
PSI_PlexinA-B
TIG_plexin
Motif
Other DBs
NCBI-GeneID:
116692578
NCBI-ProteinID:
XP_032376877
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All DBs
Position
7:complement(5547337..5611844)
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AA seq
1900 aa
AA seq
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MPPSIEIAVLLLGVLALETRRSASALHIQQTFASPNQTNNFVVDPVSRKVYLATVNTVYQ
LNGTLSIEVEKRTGPVEDNLLCHAPQLPQAPCEHPKSLTNNHNKLLKLDREQGVVVVCGS
VYQGFCELRKMENISEIAVEFPHKGEKTVFPSMLNIAANHPNASTVGLIFKSHGGNTRLL
VGATYTGAGTQFFPKNHSKEDLRFENTPEIAIRSLNIKDLSRLFTYDINPSEDNVFKIKQ
DVKTKNKLDFVHAFMQKTYSYIAFNNDAKMGLKESQPNSILARICLDTENPRKPSGPESR
KLTESYIQMPLQCGFNGNIYNRLLSVYPAEIHTDEGKSPEPYLFGVFSKGDRKSALCAFK
FGDIEEEIRQGRRNCSNSPSSDVQVLDSVIQGSGAACIQKGNLVLQPDQLDCGAAHLQHP
LALRRSLRAIPLVEYTGLTSVSVDNVHNHTVVFLGTSNGRLRKLTLLANMTVANQWTLKL
AAGEPVHHIMAFDPNDSYFLYLMTSYHMLRVKVADCDQWRSCGDCLGAGDAHCGWCTLEN
QCTIQKECAQGLLARSWISMGEGPQQCPSMTLTPPEISIAADIKDVGILINGSVPDLVGS
RVECEYEPGFSTVATVHLDYGPAQIQTCPLLPRENYQPILPGTDHLTVTVAIKVNGTFVV
SGSFIIYDCERTGAIHPKTSCVSCLSTRWKCYWDPDKYQCVSSKDESKHNLLENVASCPR
LVASEVPPSPSKMAQDFTISLSNIQEREDLECDFGTERRFEATWLNSSAVRCSGVTLSTN
QRSQVYYLNLKRRGYFSPQGEDVFVDSPQPMRVEVYNCGVGSSDCSQCWGREDQGHLCGW
CENSCRPRDDCQSIRDQCPAPEIHKISPLSGPLEGGTLLTVQGRNLGRRAGAVKVSIGEV
LCTLQPELYIVSVELVCVTGSSAHDRAYIVQVDVDQSGTGTSKEIFSYLVPKLLSIEPTK
GSRAGGTIVIIRGEHLDIGSQVRVMVNNTLECTIIEKTDESIECTMPPALQAHTDSLTVS
VCVEFENVPCQSAELSTAYIYEKNPTISSIYPKKSYLSGGRTITVTGQGFDLVQSATMDV
LEIGEKRCTVVSPFTITCPSPASSQSQQTSAQFILNGILYTGDSPFPYDSEEEEEEEPHK
GHFPLEYVEDPQFFTANKEKLIKHHPGEPLTLIINKGPTDLDLVPEEYSVMIGSYPCNIS
FHNDQLFHCTINGLLSSSERELPVTVQVGNFRHTIAKVQLGGSELAIVVSIVVCCVLLLL
CTVALVVYCTKSRRAERYWQKTLLQMEEMESQIRDEIRKGFAELQTDMTDLTKELNRSQG
IPFLEYKQFVTRTFFPKMCSDYEKSLVQPAYENDGLGPRVLPETHPLLQDWQATNTTKPN
VEEGITLFSTLLNNKHFLVTFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKD
LLVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQI
NKGSIDAITGKARYTLNEEWLLRENIEAKPQNINVSFQGCGMDSLSIRVMNTDTICQVKE
KILEAFYKNLPFSQWPRAEDVDLEWFDSGSNSKVLQDLDNSSLMEDGRKKLNTVFHYQIL
EGASLAMSMKDKRDNTLGRVKDLDTEKYVHLVLPHDDLTETKRSHRQSHRKKVLPEIYLT
RLLSTKGTLQKFLDDLFQAILSIPPDRPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTN
SLPLRFWVNILKNPQFVFDIEKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYA
KEIPEYKKRVQCYYKQIQEMAPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYKYAKRYR
NQVVSALESNPTARRTQLHHKFEQVIALVEDNIYECCSEA
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcgatagagatagccgttctgcttctcggcgtcctggctttggagacgcgc
cggagtgccagcgcgcttcacatccaacagacattcgcgtctccaaatcagacaaataac
ttcgtggtggacccggtgtccagaaaggtctacctggccaccgtcaacacagtctatcag
ctgaacgggaccttgagcatcgaggtggagaagaggaccgggccggtggaggacaacctg
ttgtgccatgcgccacagctgccccaggctccgtgcgagcatcccaaatccctcactaac
aaccacaacaagctcctgaagctggaccgagagcaaggggtcgtggtggtgtgtgggtca
gtgtatcaaggcttctgtgagctcagaaaaatggagaatatttcggagatagcggtggag
ttcccacataagggcgagaagaccgttttccccagcatgctcaacatcgctgccaatcac
ccgaacgcatccactgtcgggctcatcttcaaaagccacgggggcaacacccggcttctt
gtcggggcgacttacacaggggctggtacccagtttttcccaaagaaccacagcaaggag
gacctgcgctttgagaacaccccggagatcgccatccgctccttgaacattaaggattta
tcccgacttttcacctatgacattaacccttcagaggataatgtgttcaagatcaaacaa
gacgttaaaaccaaaaacaagctggacttcgtccacgctttcatgcagaagacttattcc
tacatcgccttcaataatgatgcgaaaatgggcctcaaggagagccagcccaacagcatt
ctcgccaggatatgtctggataccgagaacccccgaaaacccagcgggccggagagcagg
aagctcacggaatcctacatccagatgcccctacagtgtggatttaacggcaacatatac
aaccggctgctgtccgtttaccccgctgagatccacacagacgaaggaaagagcccagaa
ccgtacctgtttggagtgttttccaagggggacagaaagtccgctctgtgcgcttttaag
ttcggagacatcgaggaggagatccgacaaggccgcaggaactgctccaactctcccagc
agcgatgtgcaggtgctggacagcgttatccagggctccggggcagcctgcattcagaag
ggaaatctggtgttgcagcccgaccagctggactgtggtgcggcccacctacagcaccct
ctggccttacggaggtccctgagggccattcctctggttgaatacacgggtctcacttcg
gtctcggtggacaatgtacacaaccacactgtggtttttctgggaaccagtaatggacgt
cttcgtaagctgaccctcttggcaaacatgaccgtggccaatcagtggacactaaagctg
gctgccggtgaaccagtccaccacatcatggccttcgaccccaacgacagctacttcctt
tatctcatgacctcgtaccatatgctcagggtgaaagtggcagactgtgaccagtggagg
agctgcggcgactgtttgggagccggcgacgcccactgtggctggtgtactctggagaat
caatgtaccatccagaaggagtgtgctcaggggctgttggcacgatcctggatcagcatg
ggtgagggcccccagcaatgtccttccatgactctgacacctccagagatcagcatcgct
gcagacatcaaggatgtcggcattctgataaatggcagtgttcctgatctggttggctcc
cgggtggagtgtgaatatgagccgggtttttctacagttgccacggtgcacttggattat
ggtcccgctcagatccagacttgtcccctgctccctcgagaaaattaccaaccaatcctc
cctggcacagatcatctgactgttactgtggcaataaaagtgaatggcacattcgtggta
tctgggagcttcatcatttacgactgcgagaggaccggagcaatacaccccaagacgtca
tgtgtgagctgcctgagcaccagatggaagtgctactgggaccctgacaagtatcaatgt
gtctctagtaaagatgagtcaaagcacaaccttctagagaatgtggcttcctgtccccgc
ctggttgcctcagaggttcctccatcaccatcaaaaatggcccaagactttaccatatcc
ctcagcaacatccaggagagggaggacctggagtgtgactttgggacagagcggcgattt
gaggctacatggctgaacagctcggctgttaggtgcagcggagtaacactgtctactaat
cagaggagccaggtttactacctcaacctgaagaggagaggatactttagtccgcagggg
gaggacgtctttgtcgacagccctcagcccatgagagtggaggtgtacaactgtggagtg
ggtagttcagactgctcccagtgctggggccgggaggatcagggccacctctgtggctgg
tgtgaaaatagctgcaggccgagggatgactgccagtcaatcagggatcaatgtccagct
cctgaaattcacaagatctctcccctgagcggtccattggaaggaggcaccctgctgaca
gtacagggcaggaacctgggacggagggctggagcagtaaaggtctctattggagaggtg
ctatgtactctccagcctgagctctacattgtctctgtagagctggtgtgtgtcactggg
agctctgcacatgacagggcatatattgtccaagtggatgtggatcagagtgggacgggc
acgtcgaaggagatcttctcatacttagtcccaaagctgctctccatagagccaacgaag
ggctctcgtgctggaggaactatagtcatcatcagaggggagcacctggacattggctct
caggtcagagtcatggtcaacaacacgctagagtgcaccattatagagaaaacagatgaa
agcattgagtgcaccatgcctccagccttacaggcacacactgactcactcacagtgtca
gtgtgtgtggagtttgaaaacgttccatgtcaaagtgcagagcttagcactgcctacatc
tatgagaagaaccccaccatcagctcgatctaccccaaaaagagctatctcagtggtggc
aggaccatcacagtgacaggccagggttttgatctggtgcaaagtgccaccatggacgtc
ctggaaattggagaaaaacgctgcacagtggtttcccccttcacaatcacctgcccatcc
ccggcgtccagccagtcccagcagacctcagcgcagtttatcttaaacggaatcctctac
acgggtgacagccccttcccctatgatagtgaggaagaggaggaggaggaacctcacaag
ggtcacttcccgttggagtatgtggaggaccctcagtttttcactgccaacaaggagaaa
ctgattaaacaccacccaggagagccactgaccctcatcatcaacaaagggccaactgat
ctggacctggtgccggaggaatactcggtgatgattggctcctatccctgtaacatcagc
ttccacaacgaccagctgttccactgtaccatcaatggactgctgagctccagcgagaga
gagttgcctgtcactgtgcaagtggggaactttcgtcacaccatcgccaaagtgcagctc
ggcggcagtgagctggccatcgttgtatccattgtggtgtgctgcgtgctgctgctgctg
tgcactgtggctcttgtagtgtactgcacaaagagccgaagggcggaacgctactggcag
aaaaccttactccaaatggaggagatggagtcccagatcagagatgagatccgtaaaggc
tttgcagagctgcagacggacatgacagacctgaccaaggagctgaatcgcagccagggc
atcccctttttggagtacaaacagtttgtcacacgcacgttcttccccaagatgtgttcc
gattacgagaagagtctggtccagcccgcctacgagaatgatggcctgggaccacgtgtg
ctgccagagacccacccgctgctgcaggactggcaggctaccaacacaacaaagcctaac
gtagaggagggcatcactctgttctctactcttcttaacaacaagcacttcctggtcacg
tttgtccacgccttggagcagcagaaggactttgctgtacgagacagatgtagcctggcg
tcactgctcaccattgcccttcatggtaagcttgagtactacaccagtatcatgaaagat
cttctggtggacctgattgatgcttcggcttccaagaaccccaaactgatgctgcgccgc
accgagtctgttgtggagaaaatgctgaccaactggatgtccatctgcatgtacagctac
cttaaggaaacagtgggtgagcctttcttcctgctgctgtgtgcaatcaagcagcagatc
aacaagggctccatagacgccatcacagggaaggcccgctacaccctcaatgaggagtgg
ctgctccgtgaaaacattgaggccaagccacagaacatcaacgtgtccttccagggctgt
ggcatggactcgctgtctatcagggtcatgaatacagacacaatctgccaggttaaggaa
aaaatcctcgaagccttttataaaaacctgccgttctcccagtggcccagagcagaggat
gtagacctggaatggtttgactctggcagcaacagtaaggtcctgcaggacctggataac
tcctcactgatggaagatggcagaaagaaactcaacactgttttccattaccagatccta
gagggggcatcgctggccatgagcatgaaagacaagagggacaacaccctggggagagtg
aaagatctggatacggagaagtatgtacacttggtcctacctcatgacgacctaacagaa
accaagaggtcacacaggcagagccaccgcaagaaggtcctgcctgaaatctacctgaca
cgcctgctgtctaccaagggaactcttcagaagtttttggatgacctctttcaagccatc
ctcagcatccctccagaccgcccccctttggctatcaaatatttctttgacttcctggag
gagcaggctgacaaacggggcatcacagacccagacaccctgcacatctggaaaaccaac
agtttacctctgcgtttctgggtgaacatcctgaagaatcctcagttcgtgtttgacatc
gagaagacggatcacatggacgcctgtctgtctgtcatcgcccaagccttcatagacgcc
tgctccatttctgacctgcagctgggaaaggactcccctaccaacaagctgctgtatgcc
aaggagatccctgagtataagaagagagtgcagtgctactacaagcagatacaggaaatg
gcccctctaagtgagcaggagatgaatgctcacctggctgaggagtcccgaaaatacaga
aatgaattcaacaccaacctggccctgacagaaatctacaaatacgccaagagatacaga
aaccaggtggtgagcgctctggagtccaaccccaccgcacgtcgcactcagctgcaccac
aagttcgagcaggtcattgcccttgtggaggacaacatctatgagtgctgcagcgaagcc
tga
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