Etheostoma spectabile (orangethroat darter): 116692595
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Entry
116692595 CDS
T08457
Symbol
agrn
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04512
ECM-receptor interaction
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116692595 (agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116692595 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
esp00535
]
116692595 (agrn)
Proteoglycans [BR:
esp00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
116692595 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
SEA
EGF_laminin
Kazal_CFAI
EGF
Laminin_G_3
hEGF
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
116692595
NCBI-ProteinID:
XP_032376906
LinkDB
All DBs
Position
7:18492601..18739983
Genome browser
AA seq
2121 aa
AA seq
DB search
MGCQRTLAAGRTALLLAGLLVALWHRSAASCPERDLEDREEEANIVLTGTVDEIINMDPV
HNTYSCKVRVWRYLKGKTNVNREILLDGGNKLMIGGFGNPGICDNQVATGDTRIFFLNPA
SEAMGPEHKNELMLNSSLMRITLRNLEDVEHCVEVHKYIVADKPPHFTPAQPPDGCRGML
CGFGAVCERDQTDPAKAECVCKRVDCPSLVAPVCGSDSSTYSNECELEKAQCNSQRRIKV
LRKGPCSLKDPCTDVVCSYGSTCVQSSDGLSAKCMCPLGCEGKREQTVCGSDGKDYRNEC
ELHQHACKNQRNIRVQYQGHCDPCKDNENSLNTLCRVEALTRRPLIFSLPQSCPPGNEPL
CASDGQTYPSECAMEASGAQKGIKLRKIHAGQCRRLEHCQEECLFNAVCLVEQLSARCSC
DPIECDGTYKPVCGKDAHTYTNDCIRRKAECLSKTLISIKHQGPCDLSIPSPCLDKMCEH
GAVCVVKNNEPVCECPEACPQTSDPVCGSDGHSYGSPCEMRAMGCALQKAIHIQHKGPCD
ESCANCSFGAICDAQSGQCVCASECVESHQPVCGSDGSTYNSECELHVRACKQQMDLRVV
SQGECKTCGSTVCAWGARCVQNKCECPKCSGEAFSPVCGSDGTTYNNECELRTSTCMQKR
RIDVAKPGSCDEDCGSGGSGSGVESCEQDRCRMFGGSWDEDAEDDRCVCDFSCQSVPHNP
VCGSDGKNYSNECQLKKARCEKQERLLIQNQGPCAAISATSLPELTAPQHCSLSVYGCCH
DNVTAALGVGLAGCPSTCQCNVYGSYKGTCDPASGQCSCKPGVGGQKCDRCEPGFWNFRG
IVTENMSGCTPCNCDATGSVRDDCEQMSGLCSCKTGVKGMKCNVCPDGSKMGMNGCDKGP
EAPTSCEELVCSFGATCIEVNDQAHCECPSPDCDEKNKTKVCGSDGVTYADQCQLRTIAC
RQDEDITVQHFGQCTEIISEPADRPTPNPSATTHSSTSAATITTPAPFHPDRVWAIPPPQ
TEETETTEQPSATNPFSTLIHNQANHRHPIHNQPQPPKSTAATSTSSSHSSPAPSAAASS
FDGSGSGEPSGDDQTEEEEEGEEEVGSGIPTEASGAEEPVGPTLASTTIPTAEDRSSCEN
TDFGCCPDGKTPSSTPEGANCPSHHASFWDESQSATMRFSGFLHLDQVEGQEIFYTPEME
DPKSELFGETARSIESALNELFRKSEVQKDFMSVRVRNLAPSNSILAFVEAHFKPDTRYT
VEDIEGALLKQLKASKETSIAVKKPEDENIRFTNYGLSSPFFTTTTTTTTSVTTAAPTTT
SITTRPSTTSPYITRRPPGTTRRPYNGRRTTTASAPVTTPRPTTTTTAAVTTPAATTAAV
TIPAITTTALPPATTVAHVRGKLHHKAQKPCGSHPCLHGGTCEDDGSDFSCKCPAGRGGS
VCEKVIKYFIPSFGGQSYLAFPTMSAYHTVRIAMEFRASEMTGILLYNGQDGKKDFISLA
LVNGKVELRFNTGSGTGTVVSKVQINQGRWHQLVVTRNRRNAMLSVDNEPHIEGESPRGT
DGLNLDTDLFIGGVPEEMKQDVRERTAVATGLVGCIRLLDVNNRVLNLQESEGDSLYGSG
VGECGNNPCQPNPCNNGAACQVKEAEMFHCKCSKGFWGPTCADVHDPCEPNRCHPSSQCQ
ALPEGGYKCECPMGREGRHCEKVAERRGAYMPLFNGDSYLELKGLHLYGHDLRQKVSMTV
ILMANDSNGLIFYNGQKSDGKGDFISLSLNNGILEFRYDLGKGPATIRSKEAIQLNVWNT
INLERSNRKGEIMVNRKDPVRGEAPKSRKNLHVDLNLKESLYVGGAPDYSRLARVAALTD
GFKGTIQKIILMGTTILREENALRSSNIATFQDHPCSQEPCHNGGRCNPLLETYECACLS
GFSGGRCQNTIYEKSAGETEAIAFDGRTFIEYHNAVTKSEKALLVNKFELSIRTEATQGL
VLWSGKGVERSDYIALAIVDGHVQMTYDLGSKPVVLRSSVRVDTNRWIRIKASRALRDGS
LQVGNEAAVTGSSPLAATQLDTDGALWLGGLEELAVARRLPKAYSTGFVGCVKDVVVDGV
ELHLVEDALNSPRILHCSAAK
NT seq
6366 nt
NT seq
+upstream
nt +downstream
nt
atgggttgccagcggacactcgcggccggccggacagcgctgcttctggcggggttgctc
gtggctctgtggcaccgcagcgccgcaagttgcccggagagagacttggaggacagggaa
gaggaggccaacatagttttgaccggcaccgtggacgaaataattaacatggacccggtt
cacaatacctattcttgcaaggtcagggtgtggcgctacttaaaaggaaagaccaacgtc
aaccgcgaaattctcctggacggtggcaacaagttgatgataggcggctttggcaacccc
gggatctgcgacaaccaggtagccacgggcgacacacgcatattctttctcaaccctgcc
tcggaggccatgggtccagaacacaagaacgaactcatgctcaactcaagtctgatgagg
attaccctgcgcaacctggaggacgtggagcactgtgtggaagttcacaaatatatagtt
gcagacaaacctcctcacttcactccagcccagcctcctgatggttgcagagggatgctc
tgcggcttcggcgctgtatgtgagcgtgaccagaccgacccggccaaggctgagtgtgtt
tgcaagagagtagactgcccgtccttggtggcgccagtttgcggctcggactcgtccacc
tactcgaacgagtgtgagctggagaaagcccagtgcaactcacagagacgaattaaggtt
ctgcgcaaggggccctgctctctgaaggacccctgcaccgacgtggtctgcagctacggc
agcacctgcgtccagtcgtcagacggcttgtcggctaaatgcatgtgccccctcggctgc
gagggcaagcgcgagcagacagtgtgcggcagtgatggaaaggattaccgaaacgagtgt
gagctccatcagcacgcctgcaagaaccagaggaacatacgagtgcaataccaagggcac
tgcgacccatgcaaagacaatgagaacagcctgaacacgttgtgccgggtggaggctctc
acccgccggcccctcatcttcagcctgccgcagtcatgccccccagggaatgagcctctg
tgtgccagcgacggccaaacctacccaagcgagtgcgccatggaagcatcaggagcgcag
aaagggatcaagctcaggaagatccacgctggacaatgccgacggctggagcactgtcag
gaggagtgtctcttcaacgcagtgtgtctcgtggaacagctgagcgcccgctgctcctgt
gatcccatcgagtgtgacggcacctacaagcctgtgtgcggcaaggacgcccacacctac
accaacgactgtattcgacgcaaggcggagtgtctaagcaagaccctcatctccatcaag
caccaggggccctgtgatctcagcataccaagcccctgcctggacaagatgtgcgagcat
ggggcggtgtgcgtggtcaagaacaacgagccggtgtgtgagtgccctgaggcctgcccg
caaacgtccgacccagtgtgcggatccgacggccacagctacggcagcccctgtgagatg
cgagctatgggctgtgccctgcagaaggccattcacatccaacacaaaggaccctgtgat
gagtcttgtgccaattgctctttcggggcaatctgcgatgcccagagcgggcagtgtgtg
tgtgcatcggagtgtgtggagtcccaccagcctgtttgtggcagcgatggcagcacctac
aacagcgagtgtgagctgcatgtgcgggcctgcaaacaacagatggacctccgagtggtc
agccagggagagtgcaaaacgtgtggaagcaccgtctgtgcctggggtgcccggtgtgtc
cagaataagtgtgagtgtccaaagtgctcaggcgaggccttctccccagtgtgtggaagt
gatggcaccacctataacaatgagtgtgaactccgcacgtccacctgcatgcagaagagg
agaattgatgtggcgaagcccggcagctgtgatgaagactgtggctcaggagggtcaggc
tcaggtgtggagagctgtgaacaggaccgctgtcgcatgtttggaggctcgtgggacgag
gatgcagaggacgaccgttgtgtctgtgacttcagttgccaaagtgtgcctcacaacccg
gtttgtggctcagatggaaaaaactacagcaacgagtgccagctgaagaaggccagatgt
gagaaacaagagcgcttgctgattcagaatcagggtccctgtgcagcaatttcagccaca
tctctgcctgagctgacggcaccccagcactgcagcttgtctgtgtatggctgctgccac
gacaacgtgacggccgccttgggagttggactggcaggatgtcccagtacctgtcagtgt
aatgtctacggctcctacaaggggacgtgtgatccagcctccggccagtgctcctgtaag
ccaggtgtcgggggacagaagtgtgaccgctgcgagccgggcttctggaacttccgtggc
attgtgaccgagaacatgagtggctgcacaccgtgtaactgcgacgccacaggctcggtc
cgggacgactgtgagcagatgtcgggcctgtgttcatgcaagacaggagtgaagggcatg
aagtgcaacgtgtgtccagatggaagcaagatgggcatgaatggctgcgacaaaggtccc
gaggccccgacttcatgtgaagagttagtgtgcagttttggagctacttgcattgaggtg
aacgaccaagcccactgcgagtgcccttcacctgactgcgatgagaaaaacaaaaccaag
gtgtgtggctcagatggggtgacctatgccgaccagtgccagctgaggaccatagcctgt
aggcaggacgaggacatcacagtgcaacactttggacagtgcacagaaatcatctctgag
ccggcagaccggcccaccccaaacccctcagcaaccacccacagctcaacctctgccgcc
accatcaccacccccgcccctttccaccctgacagggtgtgggccatcccgcctccacag
acggaagagacagagaccacagagcaaccctcggccaccaaccccttttccaccctcatc
cacaaccaagcaaaccaccgccaccccatccacaaccagcctcagccgccgaagtccacc
gctgccacctccacctcctcctcccacagcagccctgctccttctgccgctgcgtcctcc
ttcgacggttcgggcagtggggagccaagtggcgacgaccagaccgaagaagaggaggaa
ggtgaagaggaagtcggtagcggcatcccaacggaggccagtggggcagaggagcctgtt
ggtcctacgctggccagcaccactatacccacagctgaggacaggtcatcctgtgaaaac
acagatttcggctgctgccctgacggcaagacaccgtccagcactccagagggcgccaac
tgcccctcccaccatgccagcttttgggatgagtctcagtccgccaccatgaggttcagc
ggtttcctccacttggaccaggtggagggccaggagattttctacacccctgagatggag
gaccccaagtcagagctgtttggagagacggcccgcagcatagagagtgctctcaatgag
ttattcaggaagtcggaggtgcagaaagactttatgagcgttcgtgtccggaacctggcg
cccagcaactccatcctggcatttgtggaggcccattttaaaccagatacaagatacacg
gtggaggacatcgaaggagccctgctgaaacagctgaaggcctctaaagagaccagcatc
gccgtgaagaagccggaggatgagaatatacgctttaccaattatggcctctcctccccg
ttcttcaccaccactaccaccaccaccacgtcagtaaccacagctgctcccaccaccacc
agcatcaccaccaggccttcaacaacctccccgtacatcacacgtcgcccaccaggcact
acccgcaggccttacaatggcagacgtaccaccacagcctccgcgccggtcaccacacca
cgacccaccaccaccaccacggcagctgtcaccacacccgctgccaccacggcagccgtc
acaattccagccatcaccacgacggccctgcctccagccaccactgttgcccatgttagg
ggcaagcttcaccacaaggcccagaagccttgcggctcccacccctgcctccacgggggc
acctgcgaggacgacggcagtgacttcagctgcaagtgccccgctgggcgaggaggctcc
gtgtgtgagaaggtgatcaagtacttcatcccgtcctttggaggccaatcatacttggct
ttcccaaccatgagtgcgtatcacacggtccgcatcgccatggagttcagagcatccgag
atgaccggcatcctgctctacaacggccaggatggcaagaaggacttcatatctctggct
ctggttaacggcaaggtggagctcaggttcaacacaggttcgggtacaggcacagtggtg
agcaaagtacaaataaatcagggccgctggcatcagctggtagtgactcgcaaccggcgc
aacgccatgctcagcgtggacaacgagccacacattgagggcgaaagtccacgcggcaca
gacggcctcaacctcgacaccgacctgttcatcgggggagtgcccgaggaaatgaagcag
gatgtaagggaaaggaccgcggtggccacaggtctggtgggctgcattcgcttgctggat
gtcaacaacagggtgctcaacctgcaggagagcgagggtgacagtctgtacggcagcggc
gttggtgaatgtggcaacaacccgtgccagccaaatccttgcaacaacggcgctgcatgc
caggtcaaggaggcagagatgttccactgcaagtgcagcaaaggattctggggtccaact
tgtgctgatgtccatgacccatgcgagcccaacaggtgccatccatcctcccagtgccag
gcgctgcccgagggaggatacaaatgcgagtgtcccatgggacgtgaagggaggcactgc
gagaaagtggctgagaggagaggggcttacatgccactatttaacggagactcttacctg
gagctgaaggggctccatctctacgggcatgatctgcgtcaaaaggtcagcatgacagtg
attcttatggccaatgactccaacggtttgatcttctacaacggccaaaaatcagatgga
aaaggagacttcatctctctgtccctcaataatggcatcctggagttccgctacgacctg
gggaagggacccgctaccatcaggagtaaggaagcaatccagctgaacgtgtggaacacc
attaacctggagcgctccaaccgtaaaggagagatcatggtgaacaggaaggaccctgtc
cgaggagaggcaccgaaatcacgcaagaacctgcacgttgatcttaacctgaaagagtcg
ctttatgttggcggagctcccgattacagccgactagcaagagttgctgcactcacggat
ggcttcaagggaacaatccagaagatcattctgatgggtaccaccatcctccgagaggag
aacgccctgcgctccagcaacatagccacgttccaggaccacccgtgttcccaggagcca
tgccacaatggcggccgctgcaaccctctgctggaaacctacgagtgtgcttgcctcagc
ggtttctcagggggacgctgtcagaacaccatctacgagaagtctgccggagagaccgag
gccattgcctttgacgggcgaacgttcattgagtaccacaacgctgttacaaagagtgag
aaggctctgctggtgaacaaatttgagctgagcatccggacagaggcgacccagggcctg
gtgctgtggagcgggaagggcgtggagcgctctgattacattgccctggccatcgtggac
ggacatgtccagatgacatacgacttgggctctaagcccgtggtgctgcgctcctcggtg
cgtgttgacaccaaccgctggatacgcatcaaggccagcagagcacttagagacggctct
ctacaggttggcaatgaagcagcggtaacagggtcttcgcctttggcagcaacacagctg
gacacagacggagcgctgtggttgggtggtctagaggagctggcggtggcccgtcggttg
cccaaggcctacagcaccggctttgttggctgcgtcaaggacgtggtggtggacggcgtg
gagctccacctggtggaggacgccttaaacagccccagaatattacactgttctgccgcc
aaataa
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