Etheostoma spectabile (orangethroat darter): 116693593
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Entry
116693593 CDS
T08457
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116693593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esp03400
]
116693593
Enzymes [BR:
esp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
116693593
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116693593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
116693593
NCBI-ProteinID:
XP_032378519
LinkDB
All DBs
Position
8:14736401..14742073
Genome browser
AA seq
449 aa
AA seq
DB search
MEDKLNGFPVVSPEYLQQWVQSAQQFQALQAQYSGFNHNHQSHYPEEQTGETAMAHMGYP
EPMMDQQEQANPGKPPAKKRGRPAQPKEPKAPKPPKVPKAPKPPKDPNAPKAKPGPKPKK
ATEAQADGKQEKIDESFKKVKRKIDRFKGMSEEEVMTKTLPDLLEYNLDYVIIGINPGLM
AAFIGRWFPGPGNHFWKCLFLSGFTEEQLNHMHDTTLPVKYKMGFTNMVARATPGSKDLS
SKELREGGKILVEKLKKFKPLIAVFNGKCIYEMFCREMFGKKPKKLDFGLQPHKIPDCDV
ALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDELKGLKKSTEIEEIDYRFDLKLAKEDA
KRMAIKEEQYDPGYEDAYGGAYAERGPEEGPAQSQTNGHCTFSNVENTEGAQEATTSQIP
GQLPDGQWMTQSFADEIPDISGGAKDGSV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagctgaatggattccctgttgtctccccggagtatcttcaacagtgggtt
cagtctgcacagcagtttcaagctctccaggcccagtattcaggcttcaaccacaatcat
cagtctcactacccggaggagcagacaggagagacagccatggcacacatgggttatcca
gaacccatgatggatcagcaggaacaagccaatccgggaaaacccccagccaaaaagaga
ggcagaccagctcaacccaaggaacccaaggctcccaaaccaccaaaagtccccaaggca
ccaaagccacctaaggacccaaatgcacctaaagccaaacctggtcctaagcccaagaag
gccactgaggctcaggcagatggcaagcaagagaagatagatgagagcttcaagaaggtt
aagaggaaaattgaccgcttcaagggaatgtcagaggaagaagtcatgacaaaaactctt
ccagacctgctggaatacaacctggactatgtcattattggcattaatccaggactgatg
gcagctttcattggacggtggtttccaggtcctggaaatcatttttggaagtgcctgttt
ttgtccggatttactgaggagcaactcaaccacatgcacgacactactctgcccgtcaaa
tacaaaatgggcttcaccaacatggtggccagggcgacaccagggagcaaagacctctca
agtaaagagttgcgtgaaggtggcaaaattcttgtagagaagctgaagaaattcaagcct
ctaattgctgtttttaatggaaaatgcatctatgaaatgttctgcagagagatgtttggt
aaaaaaccaaagaaacttgattttggtttgcagcctcacaagatccccgactgtgacgtg
gctctgtatctgatgccttcatccagcgctcgttgtgctcagttccctcgtgctcaggac
aaagtccacttctacatcaaactgagggagctccgagacgagctaaagggtctcaaaaaa
agcactgagatcgaggagattgactacaggtttgacctgaaattggccaaggaggatgcc
aagaggatggcgataaaggaggagcagtacgatcctggttatgaagatgcttacggtgga
gcatatgcagagagaggacctgaggagggtccagcccaaagccagaccaacggtcactgt
acattctcaaatgtagaaaacacagaaggagcacaggaggcgacgacgtcacaaatacca
ggccagctcccagacggacagtggatgacccagtcctttgcagacgagattccagacatc
agcggcggagcaaaggatggcagcgtataa
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