Etheostoma spectabile (orangethroat darter): 116693696
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Entry
116693696 CDS
T08457
Symbol
nr1h4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116693696 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
esp03310
]
116693696 (nr1h4)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116693696 (nr1h4)
Nuclear receptors [BR:
esp03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
116693696 (nr1h4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Put_Phosphatase
KAT3
Motif
Other DBs
NCBI-GeneID:
116693696
NCBI-ProteinID:
XP_032378737
LinkDB
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Position
8:12242655..12271404
Genome browser
AA seq
492 aa
AA seq
DB search
MNEWCPDINVVGPLQIPPSDEFSISESPHLFDILADQGSPLLQDPDILPFTSYPSMQYPC
IEPTMSSTPYYSSQNYYPQYNGDEWYSHTGIYELRKGPLEVSFDAEMEDVSAVVPAVCKR
TRHMSQAGRVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKTGGNCEM
DMYMRRKCQECRLRKCKEMGMLAELKPSSSLAGLLTEIQCKSKRLRKNTKASPGQSTGDE
TEGADNTDNKQVTSTTKLSKEKVKITKEQQALVKSIVDAYNKHQIPQDVTKKLLQEQYSA
EENFLLLTEMATNQVQVLVEFTKNIPGFLSLDREDQIALLKGSAVEAMFLRSAQVLSKRM
PNGHTEVLKERVRNSGMSEEFMTPMFNFYKSIDELQIGQEEQALLTAVTILTPDRPYVKD
YQAVERLQETMLDVLRKLCVLQHPQDPQYFARLLGRLTELRTLNHYHAEMLTSWRMNDQK
FTPLLCEIWDVQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtggtgccccgacatcaatgtggtgggacctctgcaaatcccacccagcgat
gaattctccatctcagagagcccccacttgtttgatattctggcagatcaaggaagtcct
ctcctgcaggatcccgacatcttacccttcaccagctatcccagcatgcaatacccatgc
atagagccgaccatgtcttccacaccatactactccagtcagaactactacccacagtac
aatggagatgaatggtattcacacacggggatatatgaactgaggaaaggaccgctggag
gtcagctttgatgctgagatggaggatgtgtctgctgtggtgcctgctgtgtgcaagagg
accaggcacatgtcgcaagctggaagggtcaaaggggaggaactgtgtgtggtgtgtgga
gacaaggcctctggataccactacaacgctcttacctgtgagggatgtaaaggttttttc
agacgcagcataaccaagaacgctgtgtacaaatgcaagactggcggaaactgtgagatg
gacatgtacatgcgccggaaatgccaggagtgtcggctaagaaagtgcaaagagatgggc
atgctggccgaattgaagccttcatcatcactggcaggcctgctgacagagatccagtgc
aagtctaaaaggctgcggaagaacacgaaggcctctccgggacagtcaactggagatgag
acagagggggcggacaacacagacaacaaacaggtcacctcaaccaccaaactgtcgaag
gaaaaagtcaaaatcaccaaagagcagcaggcgctcgtgaaatccatcgtagacgcttac
aacaaacatcaaattcctcaagacgtgaccaaaaagctgctccaagaacagtacagcgca
gaggaaaacttcctcctattgacagaaatggcaacaaatcaagttcaagttctggtggag
tttacaaaaaatattccaggctttctttctctggatcgtgaggatcagatcgctctgctg
aagggttcggctgtggaggccatgtttctgcgctcagctcaggttctcagcaaaaggatg
cccaatggacacacagaagttttaaaggagagggtacgcaatagtggtatgtcagaggaa
ttcatgactcccatgttcaacttttacaaaagcatcgatgaactccaaatagggcaggag
gaacaggctcttctaaccgccgtaaccattctgacaccagatcggccttatgtgaaggat
tatcaggctgtggagagacttcaggagaccatgctggacgtgctgaggaagctgtgtgtc
ctgcaacacccacaggacccacagtacttcgctcgtctcctgggccgtctgacggagctg
agaacactcaaccactaccacgcagagatgctaacgtcctggagaatgaacgaccaaaaa
tttacaccgctgctctgtgagatctgggatgtgcagtga
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