Etheostoma spectabile (orangethroat darter): 116695494
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Entry
116695494 CDS
T08457
Symbol
ptprf
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecules
esp04520
Adherens junction
esp04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116695494 (ptprf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116695494 (ptprf)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116695494 (ptprf)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
esp01009
]
116695494 (ptprf)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116695494 (ptprf)
Enzymes [BR:
esp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116695494 (ptprf)
Protein phosphatases and associated proteins [BR:
esp01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116695494 (ptprf)
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
Type II RPTP family
116695494 (ptprf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
Fn3_VIN3
Tc-R-P
PTP-SAK
CRLF2-like_D2
V-set
DSPc
Y_phosphatase3
PTPlike_phytase
C2-set_2
PTP-NADK
Fn3_PTPRU
Ig_C17orf99
Fn3_ELFN
Insulin_TMD
TMEM154
Motif
Other DBs
NCBI-GeneID:
116695494
NCBI-ProteinID:
XP_032381685
LinkDB
All DBs
Position
9:31275852..31649305
Genome browser
AA seq
1893 aa
AA seq
DB search
MDLRFRRLSPLAEGALHLVLLAGLVLPSHAESMPSFIKSPDDQTGISGGVASFVCQAVGE
PKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSAGEINTS
AKLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEIYWFKDFLPVDISS
SNGRIKQLRSGALQIENSEESDQGKYECVAVNSAGTRYSAPANLYVRVRRVPPRFSIPPT
NHEVMPGGSVNLTCVAVGAPMPYVKWMSGEVELTREEEMPIGRNVLELTNIRQSGNYTCV
AISSLGMIETTAQIIVKALPKPPTSLTVTETTATSVTLTWDSGNPEPVSYYVIQYRPKLF
DNGFQEVDGVATTRYSIGGLSPFSEYEFRVMAVNNVGRGPSSGIVDTRTSEQAPSSPPLH
IQARMLSSSTMLVQWEPPEEPNGQIRGYRVYYSSEHDAPLSAWQKHNTDDSQLTTISGLT
TDITYSLRVLGFTSVGDGPPSDVLQIKTQQGVPAQPSGFEAEAELDSRIMLSWLWPVQDP
IVSFELLYWEDSTPTDKHHETFDPAGSHAVDGLKPDTLYMFSLAARSEIGLGVFTQPIEA
RTAQSTPSAPPQEVRLLSLSSTSIKVSWAAPPTDSRHGELVRYSLAYQALTGEDVKRHQV
SGIAADVTSYVLDDLQKWTEYLVWVRAHTDVGPGPESSAACIRTKEDVPGAPPRKVEAEA
LNSTALRVSWKPPLSVKQHGQIRGYQLVYSRLENGQPHGQPVIIDVSFPEAQEAIVTGLL
PETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMMISTTIGNTALIQWQPPKEMVG
EHVGYQLQYKRAEEEAFTVKDFRKSDDHFTVTGLHKGATYIFKLCGKNRAGNGEEYVKEI
STPEDIPSSYPQNLSVVGLTATSTKLAWEPPPLPERNGKIFKYVVVYRDINSQHNNTNST
AETQMTVQGLQPDTTYDIRVQAFTSKGGGPISPSIQSRTMSTSMPVFTKNFGVKAVMKTS
VLLTWEVPETYKSQVPLKILYNQQSVEVQGNLKRKLITELQPDTDYSFVLMSRGNSAGGL
QQQVSIRTAPDLLKMKPAPYQHDVEEGGRVTISLSRAPAEAHIRWYYIVVVPVTPVSLRR
WENPEDMDIHELLEPDSSLQRETSPSQDVLQPYIAAKMDTLPEIFTLGDEKKYNGYYNKP
LPGQKQYRCFVLADLMNHESQRTFAASPFSDPIMVKLHSGMARQTEDSEMLWVMGPVLAV
ILIIIIVIAILLFKRKRTSPAKDEHMAGVKDSLLAHSSDPVEMRRLNYQTQGMDTHPPLP
SATWRTHRETKANDGLRFSQEYESIDPGQQFTWEHSNLEVSKPKNRYANVIAYDHSRVIL
TPVDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTCTIVMMTRLEE
KSRVKCDQYWPSRGTETYGMIQVTMLDTVELATYSIRTFALYKNGSSEKREVRQFQFMAW
PDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGCLIVIEAMLERMKHEKSV
DIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLYAHIQKLTQIPPGE
SVTAMELEFKKLASSKAHTSRFISANLPCNKFKNRLVNIMPFESTRVCLQPIRGVEGSDY
INASFIDGYRQQKAYMATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWP
AERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEG
FIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGAVDLFHTVKTL
RTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggaccttagattcagacggctgtcgcctctcgccgagggagctcttcatctggtgctg
ctggccgggctggtgctgccgtctcacgcagagagcatgcccagcttcatcaagtccccc
gacgatcagacagggatttcgggaggagtggcgtcgtttgtatgccaggcagtgggtgag
cccaaacctcgcatcacctggatgaagaaggggaagaaagtcagctcccagcgctttgag
gtgattgagtttgatgacggctcgggctcggtgctgcgcatccagcctctgaggacccac
cgcgacgaggccatctatgagtgcacagccaccaacagcgcgggagagatcaacaccagc
gccaagctcaccgtgttggaggaggaccagatccctcatggtttccccaccatagacatg
gggccccagctgaaggttgtggagagaacgcgcactgctacgatgctgtgcgcagccagc
ggcaaccctgacccggagatctactggttcaaagactttctgcctgttgacatcagcagc
agcaacgggcgcataaaacaactgcgatcaggagcgcttcagattgagaacagcgaggag
tcggaccagggcaaatacgagtgtgtggcagtcaacagcgccgggactcgctactctgct
ccggcgaacctttatgtccgagttcgccgtgtgcctccccgtttctccatcccccccacc
aatcacgaggtgatgcccggcggcagcgtcaacctgacctgcgtcgcggttggcgctccc
atgccttacgtcaagtggatgagcggcgaggtggagctgacccgggaagaggagatgcct
attggccgcaacgtcctggagctcaccaacatccgacagtctgggaactacacctgtgtg
gccatatcgtccctgggcatgatcgagaccacggcccagatcattgtcaaagccctgccc
aagccacccacttccctcactgtgacagaaaccacagccaccagtgtcactctgacctgg
gattccggaaatccagaaccggtatcctactatgtgatccagtacaggcccaaactgttt
gacaacggcttccaggaagtagacggggtagccacaacccgatacagcattgggggcctc
agccccttctcagaatatgaatttcgtgtcatggctgtcaacaacgtgggcagggggcct
tccagcggtattgtagacacccgaacaagtgagcaagccccctcatcaccgcctcttcac
atccaggcacggatgctgagctccagcaccatgctggtccagtgggagcctccagaggag
cccaatggccaaatccggggctaccgggtctactacagctcggaacatgacgccccgctc
agcgcctggcagaaacacaacacagatgacagccagctcaccaccatctcaggcctgacc
acagatatcacctacagccttagggtactgggcttcacctctgtgggggatgggccgcct
tctgatgtgctgcagatcaagacccagcagggagttccagctcagccgtctggttttgag
gccgaggccgagttggactcacgcatcatgctgtcctggctttggcctgtccaggacccc
attgttagctttgaactgctctactgggaagacagcactcctacagacaagcatcatgag
acgttcgacccagcgggctcccatgcagttgatggacttaagccagacacactctacatg
ttttccctggcagcaagatcagagattggtttaggagtctttactcagccaattgaggcc
aggacggcccagtccaccccctcggcccctccccaggaggtacgcttgctcagcctcagc
tccaccagcatcaaggtgagttgggcggcgccgcccacagacagccgccacggggagcta
gtgcgctactccctggcctaccaagcactcacaggggaggacgtgaagcgccaccaggtg
tcaggaatcgctgctgatgtcaccagctatgtgctggacgacctgcagaagtggactgag
tatttggtgtgggtgagggctcacactgacgtcgggcctggcccggagagctcggcagcc
tgcatcagaaccaaggaagacgtgcctggagctccacccaggaaggtggaggcagaagcc
ctcaactccactgccctccgggtgagctggaagccccccctgtctgttaagcagcacggc
cagattcgaggctaccagctggtttactcccggctggaaaacggacagcctcacggccag
ccggtcatcattgacgtttcctttcctgaagcccaggaggccatagtaacaggtctgctc
ccggagaccacttactcagtgactgtggctgcgtacaccaccaagggcgatggtgctcgc
agcaaagccaaagtggtcaccaccacaggagcagtgcctggcaagcccactatgatgatc
agcaccaccatagggaacaccgctctgatccagtggcagccgccgaaggagatggtgggg
gagcatgtgggataccagctgcagtacaagagagcagaggaggaagctttcaccgtcaaa
gacttccgaaagtcagacgatcacttcacagtcactggcctccacaagggagccacctac
atcttcaaactgtgcggcaaaaaccgagccggcaacggggaggaatacgtgaaggagatc
agcacccctgaggacattcccagcagctacccccagaatctgagcgtggtaggcctgacc
gccacctccaccaagctggcctgggagcccccgccgctgcccgagaggaacggaaagatt
ttcaagtacgtggtggtgtaccgagatatcaacagccagcacaacaacaccaacagcacc
gcggaaacacagatgaccgtccaaggtttgcagccggacaccacctacgacatcagagtc
caagctttcaccagcaagggggggggaccaatcagccccagcattcagagtcggaccatg
tccacgtccatgccagtgttcaccaagaactttggtgtgaaggctgtgatgaaaacctct
gtcctgctgacctgggaagtgccagaaacctacaaatcccaagtgcctcttaagatcctg
tacaaccagcagagtgtggaagtccaaggcaacctgaagaggaagctgatcacagagctg
cagccggatacggattattccttcgtgctaatgagccggggaaacagtgccggcggcctc
cagcagcaggtttccatccgaacggctccggatctgctgaaaatgaaaccggctccatac
caacacgatgtggaggaggggggtagagtaaccatcagtctgtccagggcgcctgctgaa
gcccacatcaggtggtactacatagtggttgtccctgtcaccccggtttctctgagaaga
tgggagaaccctgaagacatggacatacatgagctcttggagcccgacagcagtctgcag
agagagacgagtccgagccaggacgtcctgcagccctacatcgctgccaagatggacact
ctgcccgagatcttcacactaggcgatgagaagaaatacaacggctattacaacaaaccc
ctcccgggccagaagcagtaccgctgctttgttctggcagacctgatgaaccacgagtct
cagaggacttttgcagccagcccgttctctgatcccatcatggtgaagctccacagtggg
atggcccgacaaaccgaggactccgagatgctgtgggtgatggggcccgtgctggcagtc
attctcatcatcatcatagtcattgctattcttctcttcaagaggaaacgaacatctcca
gccaaggatgagcacatggcgggggtcaaggactcactgctggcccactcctcagaccct
gtggagatgaggcgactcaactatcagacacaaggcatggacacacatcctccattgccg
tctgcgacctggcggacacatagagagactaaggccaatgacggtcttcgcttctctcag
gagtacgagtctattgatccaggacagcagttcacctgggagcactccaaccttgaagtc
agcaagccaaagaaccgctatgcaaatgtgatcgcctacgaccactccagggtcatcctc
acacctgtggatggggttccaggtagcgactacatcaacgccaactacattgacggctac
aggaagcagaatgcttacatcgccacccaggggccgctgccggagacgctgagcgacttc
tggaggatggtgtgggagcagaggacctgcaccatcgtcatgatgacccgtctggaggag
aagtcccgggtgaaatgtgaccagtactggcccagtcgaggaacagagacatatgggatg
atccaggtgaccatgctggacactgttgagctggctacgtacagcattcgcacattcgcc
ctctataagaatggctcgagtgagaagagagaggttcgacagttccagttcatggcctgg
cctgatcatggagtgcctgagtaccccaccccaatactggcctttctacgcagagtcaag
gcctgtaatcctccagacgctggacccatggtggtccactgcagtgccggcgtgggccga
acaggctgcctcattgtgatcgaagccatgctggagaggatgaaacacgagaagtcggtg
gacatttacggtcatgtgacatgtatgcgcgctcagaggaactacatggtgcaaacagag
gatcagtacatattcatccacgaggccctgctggaagctgcaacatgtggcaacacagag
gtccctgcccggaacctgtacgcccacatccagaagctcacccagatcccccccggagag
agtgtcaccgccatggaactggagttcaagaaactggccagctctaaagcacatacctca
agattcatcagtgccaacctgccgtgcaacaaattcaagaaccgcctggtgaacatcatg
cctttcgagtccacccgtgtctgcctgcagccaatcagaggggtggagggctccgactac
atcaacgccagcttcatcgacggatacaggcagcagaaagcgtacatggccacccagggc
ccgttagccgagaccactgaggacttctggagaatgttgtgggaacacaactccaccatt
gtagtcatgctcaccaaactccgcgagatgggacgggaaaagtgccatcagtactggcct
gccgagcgctccgcacgctaccagtactttgttgtggaccccatggctgagtacaacatg
cctcagtacatcctgagagagttcaaagtcacagacgccagggatggtcagtcgaggacc
atcaggcagtttcagttcaccgactggccagagcaaggagtgccaaaaactggggaggga
ttcatcgatttcatcggccaagtccataaaactaaagagcaattcggacaagatggacca
attactgtgcactgcagtgccggtgttgggcggaccggtgtgttcatcaccctgagcatc
gtcttggagaggatgagatacgagggagcggtggacctattccacaccgtcaagacgctc
cgaactcagaggccggccatggtgcagacagaggaccagtaccaactgtgctaccgggct
gctctggagtaccttggaagctttgatcactatgcaacataa
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integrated database retrieval system
