Etheostoma spectabile (orangethroat darter): 116696667
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Entry
116696667 CDS
T08457
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116696667
Cell adhesion molecules [BR:
esp04515
]
Cadherins
Protocadherins
116696667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
116696667
NCBI-ProteinID:
XP_032383653
LinkDB
All DBs
Position
10:complement(16950199..17005908)
Genome browser
AA seq
968 aa
AA seq
DB search
MDSRQRKRSGGGRLWRLCFYLACLSCASAQLSYSVSEELIPGSVVGNIAKDLSLSAHGIV
QRRLRVVSESTTQYFEVKQATGDLVIKQVIDREQMCELSSACSLHLQIVLEDPLDIHRVV
VDILDVNDNAPQFSTSNISLEISEAAAPGTRFRLESAHDPDVGTNSLRTYHLAANDFFIL
NVETKSDGSKFPELMVNKPLDRETQASFRLMLTAVDGGQPERSGSTLMLIKVLDVNDNAP
VFDETVKKVRLLENVARGTLVTKLNATDADSGNNGEISFMFSKYTPERVVNLFSVDSKNG
EIRVKGDVDYEIATAYHITVQARDGGSPAMEGSCNVVVDIIDVNDNAPEVTLTSLTSPIR
EDSAPETVIALISARDLDSGVNGEVTLTVQPGLPFKLNSAFGRHYSLTTAGNLDRETVPE
YTVVIKATDAGSPPLSSQTTFVVKLSDVNDNAPTFSQPSYSVDIPENNAPSAPIAAVSAT
DPDLGDNARISYTILSGMVQGSPISSYVYINPESGHIYSMRSLDHEQLKAFRIEVQARDA
GVPPRTSNVTVHVFVVDVNDNMPVIVHPAYPKDKGLQFTVPPSANPGHLINKLVGVDADS
GHNAWLFYSIAPGPNAGMFRIGAHTGELRTARKWAEEEGGSTYDIMIIIQDNGDPPRSSS
VNITVTVDEKGTANDAPASPRHTPFYHRTGMSDITLYLIISLACVSAVSFITFVIIMIRC
LRHRDPMLGDSDCNCCYGRHRSSRYHQRPSKDLHLQLNTDGPIRYMEVVGGPQDPHTRTY
RPCYSTISSRSDFVFMKTPMLSQNNTLNMTLSRKHLMNSANEQKPPNNDWRFTQGPRPGP
SGATGGPEVAMGTGPWPQPPTEAEQLQALMAAANEVSEATATLGPGTMGLSTRYSPQFTL
QHVPDYRQNVYIPGSTATLTSNPQQQQATAQQAAQQALPPPQASAQPEPPKAAQTPASKK
KSTKKEKK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggactccagacagaggaagcgctccggaggagggaggctgtggaggctttgcttttat
ctagcttgcctctcctgtgcgtcagctcagctcagctattccgtgtcggaggaactaatt
ccgggctctgtcgttgggaatatcgctaaagatttgagtctttctgctcacggaattgtt
cagaggaggttgcgggtggtctcggaatccacaacgcagtattttgaggtaaaacaggca
accggcgatttggttatcaaacaagtaattgacagggagcaaatgtgcgaattgagttct
gcatgttcactacaccttcaaatagttctcgaggatcctttagacattcatcgagtcgta
gtggacattctggatgttaatgacaatgcaccgcagttttcaaccagcaacatttctcta
gagatatcggaggcggctgctccaggcacaaggttccgtttggagagcgcacacgaccca
gacgtgggtaccaactcgttacgcacttaccatctggcagcaaatgacttttttattctg
aacgtggaaactaaaagtgacggcagcaagtttccagagctaatggtgaataaacctttg
gacagggagacgcaggcctcgtttcgccttatgctcactgccgtagatgggggccagccg
gagagatctggctcaacacttatgctcattaaagttttagatgtaaatgacaatgcgccc
gtctttgacgagactgtaaagaaagttaggctattagaaaatgttgcacgcggcacttta
gttacaaaattgaacgcgactgacgcggattcgggtaacaacggagaaatatctttcatg
tttagtaaatacacaccggaacgtgttgttaatcttttcagtgtggattctaagaacggt
gagatccgtgtgaagggtgatgtggattatgagatagccactgcataccacatcacagtg
caggccagagacggtggctctcccgctatggaggggtcctgtaacgttgttgtggacatc
attgatgtgaatgacaacgcaccagaggtgaccctgacgtcactgaccagtcctatcagg
gaggactcagcaccagagactgtgatagcgctcataagtgcacgggacctggactctggt
gtgaatggggaggttacattaactgtccaaccaggtttgccattcaaacttaactcagct
tttggcaggcattacagcctcactactgctggaaacctagaccgtgagactgtcccagaa
tatacagtggtcatcaaggccactgatgctggttcccctcccctttcatcacaaaccacc
tttgtggtgaagctctctgatgtaaatgacaatgcccccactttctctcagccttcatac
tctgtggacattcccgagaacaatgctcccagtgcccccatcgctgctgtttcagccacc
gacccagaccttggtgacaatgcccgcatctcctacaccattctttccggcatggtccag
ggctcacccatatcttcttatgtttacattaatccagagagtggccacatctacagcatg
cgctctttggatcatgaacagctaaaagctttccgtattgaggtgcaggcccgggatgct
ggggttcccccacggacatccaacgtcacggtgcatgtgtttgtggtggatgtgaatgac
aacatgccagtgattgtacaccctgcctacccaaaagacaaaggattacagttcactgtg
cccccatctgccaacccagggcacctcataaataaacttgtaggggtggatgcagacagt
gggcacaatgcatggttgttttactccatcgcccctggaccaaatgctggcatgttccgt
ataggggcgcacaccggtgagctccgcacagcccgcaagtgggcagaggaggaagggggc
tcgacttatgacataatgatcatcattcaggacaatggtgatccaccgaggtccagttct
gtgaacatcacagtaactgtggatgagaagggcacggccaacgatgctccagcaagccct
cgccacacacccttctaccaccgcactgggatgtcggacatcactttgtacctcattatc
tctctagcctgtgtatcagctgtttccttcatcacctttgtcatcatcatgattcgctgc
ctaaggcaccgtgacccaatgcttggagactctgattgcaactgttgctacggccgccac
aggtccagccgctaccatcagaggccaagcaaggacctgcatctgcagctcaataccgat
ggacccatacgctatatggaggttgtgggaggcccccaagacccgcacacacgcacttac
aggccctgctactccaccatatccagccggagtgactttgtatttatgaagacacccatg
ctgagtcaaaacaacacactcaacatgacactcagcaggaagcaccttatgaactcagcc
aatgagcaaaagccccccaacaatgactggcgcttcacacagggaccgagacccggacct
agtggggcaactggaggacctgaggttgccatgggaactggcccctggccccagccacca
actgaggctgagcagctccaggccctgatggctgcagccaacgaagtcagcgaggctacg
gccaccctgggacctggcaccatgggcctgagcacccgctacagcccccagttcaccctg
cagcacgtgcccgactatcgccagaacgtctacatccctggtagcacggccaccctcacc
tccaacccccagcagcagcaggccacggcccagcaggccgcccagcaggcgctgcccccg
ccccaggcctcggcccagcccgagccccccaaggctgcccagacccctgcctccaagaag
aagtccaccaagaaggagaagaagtag
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