Etheostoma spectabile (orangethroat darter): 116697253
Help
Entry
116697253 CDS
T08457
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04010
MAPK signaling pathway
esp04020
Calcium signaling pathway
esp04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116697253
04020 Calcium signaling pathway
116697253
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116697253
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
esp01001
]
116697253
Enzymes [BR:
esp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116697253
Protein kinases [BR:
esp01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
116697253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_VEGFR-1-like_5th
ig
Ig_2
VEGFR-2_TMD
V-set
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
Izumo-Ig
Haspin_kinase
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
116697253
NCBI-ProteinID:
XP_032384472
LinkDB
All DBs
Position
10:13728263..13783756
Genome browser
AA seq
1310 aa
AA seq
DB search
MVSSDCFRLVLVILCGSSLTNGHLEIEHALKTQPSADPLTLSKDQLLTLICKGHGLLQWT
LADPGRLTSSEGVKVEQCDSKHHSHCSKLTITNLIANDTGRYSCKYSKNGSDHITSTYVY
VKDPEQPFVVSQYSSPEILFSYSHETKLVVPCRTSSPDAVVKLTGLRPLSGKVKKEMVWD
PMVGFKIPYDPATEFTMLTCTTVVNGREFHSKYIPKRLTIVLNNVKITPDRVKVLVGDTL
MLNCTGETTYNGRINFTWDIPKKRENNLYTNKTEVRPAKVIVMSKALFLPNITMEDKGVY
RCKAELEPTIYKNVSAKVLVYEHPFLNVSYKHERPSTVTAKEGRKKLVFEPKVNALPPPD
TIAWYKDGVPIDKNFTCYKISGFNLIITDVQQKHAGVFTISLGNQVKGLSRNLSYTLVVD
VKPIISEAELASVDVQPYMFGKQHQLTCTAYGVPLPNITWLWQPCQSDPALIDCSVNTKP
ILINIDDRRNYSYNWIKSISVKAELVKGKNKTVSTLVIGEASVSGNYSCVAQNEDGTSTM
IIPFYVDDHPEEITTKPRTAIEGDDVILTCRATRYLYTNLQWLDSRNQTITSNVSSLQLS
RNSISISLHLHNVSQNSNTGYKCRAYKLYKIFELKTAELIVDVRKRPWLSQNLTNQDVNS
SSTLMLACLALGVPRPYIMWNKNDVPVEEGPGITVGKDGVLTIERVKKDDEGLYECVAVN
AEGIAKTSAVVTVIGDELKPNVEVIILVCTGAAATFLWLMLILFIRKLRKQPPQYKMGPS
IIIDPDECPLEEQNDLLQYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCK
TVAVKMLKGGATSNERKALMSELKILIHIGHHLNVVNLLGACTKPGGPLMMIVEFCKYGN
LSNYLRGKRDDFRVYKSQDGKVVSSGSGCELSELMKRRLESVASTGSSASSGFIEDKSYC
DSEEEEEEAEDLYKRVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVK
ICDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLMWEIFSLGA
SPYPGVQIDEEFCCRLKEGTRMRAPEYSSSEIYQTMLDCWQGEPQERPTFTELVEQLGDL
LQASVQQEGKHYIPINTALLAKVGDPSATVPSEEMPTRPMSHRDSGSTWNIKIRPGSVKT
FDEVTMEDGTNKTHEGGQSDSGMGLSSDNMETLKRLESLASRPLSIMALAMKAVSKSKES
VLSDTEKEKYPPTVPSLDFSLDDSALDADLECHSPPPDYNYVVRYSTPPV
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggtctcatccgactgcttcagattggtccttgtcatcttgtgtggctcatcgctcaca
aatggacatttggagatagagcatgcgctgaagactcagccttctgccgatcccctcact
ctttctaaggaccagttgttaaccctcatatgcaaaggtcatggcctgctgcaatggaca
cttgctgatcccggtcgattgacctcatcagagggggtgaaggtggagcagtgtgattcc
aaacatcactcacactgcagcaaactgacaatcacaaacttgattgccaatgacacagga
aggtacagctgtaaatactccaaaaatggttcagaccacatcacctccacctacgtgtat
gtcaaagatcccgagcaaccatttgtggtgtcccagtattcttcacctgaaatcttgttc
agctacagccatgagaccaagcttgtggtcccctgccggacttcctctcctgatgctgtt
gtaaaactcacagggctccgaccattatcagggaaggttaaaaaggaaatggtatgggat
ccgatggtcggattcaagattccctatgatcccgccactgagtttactatgctcacctgt
accaccgtggtcaacggtcgtgagttccactcaaaatacatccctaaaagactgactatt
gttcttaataatgtgaagatcaccccagaccgtgtcaaagtgttggttggagacacctta
atgctcaactgtactggtgagactacctataatggaagaatcaacttcacatgggatatt
ccaaaaaagagagaaaataatctttatacgaacaagacagaagtccgccctgctaaggtt
attgtgatgagcaaggctttattcttgccaaacattaccatggaggataagggagtttac
cgctgcaaagctgagcttgaacccacgatatacaagaatgtctcagcaaaagtccttgtc
tatgagcatccgttcctcaatgtctcttataagcatgagcggcctagtacggtgactgcc
aaagaaggtagaaaaaagcttgtatttgagcccaaggtcaacgctctgccaccaccagac
acgatagcatggtataaggatggggtccctatcgacaagaatttcacctgttacaagatt
tctggttttaacttgatcatcactgatgtgcagcagaagcatgctggggtcttcaccata
agcctgggcaaccaagtgaagggcttgtccaggaatctgagctacacgctggtagtcgat
gtaaagccaatcatttcagaggcagagcttgcctctgtggacgtgcagccctacatgttt
ggcaaacagcatcagctaacctgcactgcttacggggtgcccttgccaaacatcacttgg
ctctggcaaccgtgtcagtcagaccctgcgcttattgattgcagtgtaaacactaagcca
atactgatcaacattgatgacaggagaaactactcttacaactggattaagagcataagt
gtcaaagcagaactggttaaaggaaaaaacaagactgtgagcaccctggtgataggagaa
gctagcgtctcaggaaattactcctgtgtggcccagaatgaggatggcaccagcacaatg
ataatccctttctacgttgatgatcaccctgaagaaatcaccaccaagcctcggacagcc
attgagggggatgacgtcattcttacctgtcgggcaactcgctacctatacacaaatcta
cagtggttggattccagaaatcaaacgatcacttccaatgtgtccagtctgcaacttagc
cgcaactccatttccatttctctccatctgcataatgtgtcccaaaacagcaatacaggt
tacaagtgccgagcatacaagctctacaagatttttgaactcaagaccgctgaacttatt
gtggatgtgagaaaacgcccctggctgagtcaaaatctaactaatcaagatgtgaacagt
agcagcaccttgatgctggcttgtttagctctgggagttcctcgtccgtacatcatgtgg
aacaaaaatgacgttccggtggaagaaggcccaggtatcactgtgggaaaggatggggtt
ctgaccattgagagggtgaagaaagacgatgagggtctctatgagtgtgtagccgtcaat
gctgagggaatcgcaaaaacaagtgctgttgttactgtgatcggggatgaattgaagcca
aacgttgaggtaatcattttggtttgtacaggagctgcagccacattcctctggctcatg
cttatcctcttcatccgcaagctaaggaagcaaccgccacagtataagatgggtccgtct
atcatcattgaccctgacgagtgtcccctcgaggagcagaatgatcttcttcagtatgac
agcagcaaatgggagttcccccgagaccgcctgcgactaggcaaaactcttggccacggt
gcgtttggaaaagtggtagaggcttctgcctttgggatcgacaagctctcaacctgcaag
actgttgctgtcaaaatgttaaaaggaggcgctacatcaaatgagcggaaagctctgatg
tcagagttaaagatcctgatccacattggccatcacctgaatgtggtcaacctgctggga
gcctgcacgaagcctggaggcccattgatgatgatagtggagttctgcaaatatgggaac
ttgtccaactatttgagaggaaagagagacgactttcgcgtctacaagagccaggacggt
aaggttgtgtcgtcaggatcgggctgcgagctgagcgagctgatgaagcgccgcctggag
agtgtggccagcaccggaagctcggctagctctggcttcatcgaagataagagctactgc
gactcagaggaagaggaagaagaagctgaggatttatataaaagagtcctgacgttggaa
gatttaatatgttacagtttccaagttgcaaaaggcatggagttcttggcttcacgcaag
tgcatacatcgtgatttggctgcacgaaacatcctgctttctgagaataatgttgtgaag
atttgtgattttggacttgccagagacatctacaaagaccctgattatgtgcgcaaagga
gatgccagactgccgctgaagtggatggcacctgaggccatttttgacaagatctacacg
actcagagcgacgtttggtcctttggtgttctcatgtgggagatcttctctttgggtgcc
tccccataccctggagtccaaattgatgaagaattttgctgcaggctgaaagaggggacc
aggatgagagcgccagaatactcttcctctgaaatatatcagaccatgttggactgctgg
cagggggagccacaggagcgaccgaccttcactgagctggtggaacagcttggagatcta
cttcaggccagcgtgcaacaggagggaaagcactacataccaatcaacacagccctgctg
gcaaaggtgggagacccgtcagccacagtgccgtcagaggagatgcccacacgacctatg
tcccaccgcgactcagggagcacctggaacatcaagatccgtcctggtagtgtcaaaacc
tttgacgaggttaccatggaggacgggactaataagacccacgagggcggtcagtcagac
agcgggatgggcctgtcatctgacaacatggagactctgaagcgcctagaatcattggca
agccgacccctgagcatcatggccctggcgatgaaggcagtgagtaagagtaaagagtct
gtgctgagtgacacagagaaggagaagtacccacccacagtcccctctctggacttcagt
cttgatgactcggccctggatgcagatttggagtgtcacagccctccccctgactacaac
tatgtggtgcgctactccaccccgcctgtgtaa
DBGET
integrated database retrieval system
