Etheostoma spectabile (orangethroat darter): 116697608
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Entry
116697608 CDS
T08457
Symbol
rapgef4
Name
(RefSeq) rap guanine nucleotide exchange factor 4
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04081
Hormone signaling
esp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
116697608 (rapgef4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
116697608 (rapgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116697608 (rapgef4)
Membrane trafficking [BR:
esp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
116697608 (rapgef4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Vit_b-sht_shell
RA
Motif
Other DBs
NCBI-GeneID:
116697608
NCBI-ProteinID:
XP_032384828
LinkDB
All DBs
Position
11:complement(8721794..8754013)
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AA seq
1025 aa
AA seq
DB search
MVAAHTSSHSSESAEWIICLDKRPAERSGEDVDIILARLKNMKVFERFHPSLLQQICMCG
FYECLEKGITLYRQGDIGTSWYAVLSGSLDVKVSVTASYQHAVTICTLGTGTAFGESILN
NTPRHATIVTREFSELLRIEQREFRSLWEKYHKYMAGLLSPPYGVMDSGCSGDRMPEKEN
ISDNSFVSVSKHQNKKSFIESPAKSHLKCISQVPSEKILRAGKILRNAILSRAPHMIRDR
KYHLKTYRQCCVGTELVDWQMQQSSCIHSRIQAVGMWQVLLEEGVLNHVDQELSFQDKYL
FYRFLDDEQEDASLPDEEERKESQEELQDTLLLLSQIGPDAHMRMILSKHPSERTADDLE
IIYEELLHIKALSHLSTTVKRELAGVLIFESHAKAGTVLFSQGEEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVNKEDFNRILRDVEANTV
RLKEHGQDVLVLEKSLGSSRTSNHGASSSHYKYKVMSGTPEKILEHLLEMMRLDSQFTES
DSALDDYVLMHCVFIPNSQLCPVLMAHYHAQASQGSEQEKLDYTLNNKRRVIRLVMQWAA
VHGDHLQEEDSSVAFLKEFLMAVSNDAKAIPDLRDQLTELEKSVKRNTEDARVSRKKHKV
LLRQFSMGDEKLQKRQPIKSNDEILLKVYCCDHTYTTIRVPVAASVREVIGAVADKLGSA
EDLLLVNLSSTGEKVIFKPNDVSVFSTLSINGRLFASRRDQLDSLVDPSTQQEGSSTGLL
AGFELMSSKDVAYHMTSYDWELFHCVHELELIYHTFGRQNVKKTTVNLDLFLRRFNEIQF
WVITEMCLCSQLNKRVQLLKKFIKIAAHCKDYRNLNAFFAIIMGLSNPAVCRLRQTWEKL
PNKFKKFYSEFENFMDPSRNHRAYRLTVAKLEPPIIPFMPLLIKDMTFTHEGNKTFIDYL
VNFEKMRMIANTVKIVRYCRSQPFSPDSPLASKNPEVRTYVRQLNVIDNQRTLSQLSHGL
EPRRS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagctcacacttcttcacattcgtcggaatctgccgagtggattatctgtctg
gataagagaccagcagagcgctctggagaagatgttgacataatcctggcacgtctgaaa
aatatgaaggtctttgagagattccaccccagtttgctgcagcagatttgcatgtgtgga
ttctatgagtgcttggagaaaggcatcactttgtatcgccaaggagacattggcaccagc
tggtatgccgtcctctctggttcactggatgtcaaagtttcagtgacagcaagttatcag
catgctgtcactatatgcacgctgggcactgggacagcatttggggagtcaattctgaat
aacaccccccggcatgccaccattgtcacacgggaattcagtgagctcctacgcattgag
cagcgggagttcaggtccctgtgggagaaatatcataagtacatggctggcctgctctcc
ccaccctatggtgtgatggacagcggatgtagtggtgacagaatgccggaaaaagagaac
ataagtgacaactcatttgtttcagtctccaaacatcagaataagaagtcattcattgaa
agtccagccaaatctcaccttaaatgcatttctcaggtcccgtctgagaagatcctgcgt
gcgggtaagattctccgtaacgccatcctctccagggcgcctcacatgatcagagacaga
aagtaccatttgaagacatacaggcagtgttgcgtggggacagagttggttgactggcaa
atgcaacagagctcatgcatccactctcgtattcaggctgtgggcatgtggcaggtgctg
ctggaagaaggtgttctcaaccatgtggaccaggagctgagcttccaggacaagtacctt
ttctaccgctttctggatgacgagcaggaggatgctagtttacccgatgaggaggagagg
aaagaaagccaagaggagctgcaggacaccctgcttcttctctcacagattggacctgac
gcccacatgaggatgattctgagcaaacatccctctgaaagaacagcagatgatttggag
atcatttatgaagagctgctccatataaaggccttatctcacctatccaccactgtgaag
agagaactggcaggagtgctgatctttgagtctcatgcaaaggcaggaaccgtgttgttc
agtcagggggaggagggtacatcatggtatattattttgaagggctcagtcaacgttgtc
atctatggaaaaggtgttgtttgcactcttcacgagggagacgactttggaaagctcgct
ctagtcaacgatgccccccgagctgcctccattgtcttgcgagaggacaactgtcacttc
ctgagagtcaacaaggaggactttaacaggattttaagggacgtggaggccaacacggtg
cgtctgaaggagcatggtcaggatgttctggtgttagagaagagtctcggcagcagtcga
acctccaaccatggagcctcgtcctcccattacaaatacaaggtcatgtcagggactccg
gagaagattttggagcaccttcttgaaatgatgcgattggattctcaattcacagagtca
gactcagccttagatgactatgtgctcatgcattgtgtcttcatcccaaacagtcaacta
tgtccggtgttgatggcccactaccatgcccaggcctcgcagggctctgaacaagagaag
ctggactatactcttaacaacaagcgtagggtgatccgcctggtgatgcagtgggctgct
gtacatggagatcacctgcaggaggaggattcctctgtggctttcctaaaggagtttctc
atggctgtatctaatgatgccaaagcaattccagacctcagggatcaattaacagaactg
gagaaaagtgtgaagcgaaacactgaagatgccagagtttcacggaaaaagcacaaagtc
ctactgcggcagtttagtatgggggatgagaagcttcagaaacgtcagcccatcaagagt
aatgatgaaattctgctcaaagtctactgctgtgaccacacctacacaacaatccgagtc
cctgtggctgcctcagtaagggaggtcatcggtgctgtggccgacaagctggggtcagcg
gaggacctgctcctggtcaacctcagttcgacaggagagaaagtcatcttcaagcccaat
gatgtttcagtgttctccactcttagcataaatggacggttgttcgccagccggagggat
cagttggattctttggtggacccctctacccagcaggagggttcctccacaggtctgttg
gccggttttgagttaatgagctctaaggatgtggcttaccacatgacttcctatgactgg
gagctctttcactgtgtacatgagcttgaactcatctaccatacatttgggaggcaaaac
gtcaagaaaaccacagtgaacctggacctgttcctgaggaggtttaatgaaattcagttt
tgggtgatcacagagatgtgtctgtgttctcagctcaacaagagggtgcagcttctgaag
aagttcatcaagattgcagcccactgcaaagattacaggaatctgaatgccttctttgct
atcattatgggactgagtaacccagctgtgtgcagattgaggcagacctgggagaaactt
cctaacaaattcaagaagttttattcggaatttgaaaacttcatggacccgtccaggaac
caccgggcgtaccgactgacagttgccaagctggaacctcccatcattcctttcatgccg
ctgctaatcaaagacatgacattcactcatgagggcaacaagacgtttattgactatttg
gtcaattttgagaaaatgcggatgatcgctaacacggtgaagatagtgagatactgtagg
agccaaccattcagtccagattcacctctggctagcaagaacccagaagttcggacttat
gtacgtcaactcaacgtgatcgacaaccaaaggacgctatctcagctctctcatggactt
gagccccgcaggtcttaa
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