Etheostoma spectabile (orangethroat darter): 116697929
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Entry
116697929 CDS
T08457
Symbol
cxcl12
Name
(RefSeq) stromal cell-derived factor 1
KO
K10031
C-X-C motif chemokine 12
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04060
Cytokine-cytokine receptor interaction
esp04672
Intestinal immune network for IgA production
esp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116697929 (cxcl12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116697929 (cxcl12)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
116697929 (cxcl12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
esp04052
]
116697929 (cxcl12)
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116697929 (cxcl12)
Cytokines and neuropeptides [BR:
esp04052
]
Cytokines
Chemokines
116697929 (cxcl12)
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Chemokines
116697929 (cxcl12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
116697929
NCBI-ProteinID:
XP_032385459
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All DBs
Position
2:21064605..21077793
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AA seq
102 aa
AA seq
DB search
MDVKLLALMALLAVATHVPTSNAKPISLVERCYCRSTLNTVPQRSIKELKFLHTPNCPFQ
VIAKLKNNREVCINPETKWLQQYLKNAINKVKKSRRRNNKKT
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaactgctggcactgatggctctgctggccgtggccacacatgtaccaacc
tccaatgcaaagcccatcagtctggtagagcggtgctattgtcgttcaaccctcaacacg
gttcctcagcgctccatcaaagagctcaagttcctccacacacccaactgccccttccaa
gtcattgccaagctgaagaacaacagggaagtttgcatcaacccggagaccaagtggctg
cagcagtacttaaagaacgccattaacaaggtgaagaaatctagaagacgcaataacaag
aaaacctaa
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