Etheostoma spectabile (orangethroat darter): 116698668
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Entry
116698668 CDS
T08457
Symbol
sharpin
Name
(RefSeq) sharpin isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04217
Necroptosis
esp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
116698668 (sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116698668 (sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116698668 (sharpin)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
116698668 (sharpin)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
CATSPERB_Ig-like
ubiquitin
Motif
Other DBs
NCBI-GeneID:
116698668
NCBI-ProteinID:
XP_032386602
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Position
12:9340315..9349749
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AA seq
448 aa
AA seq
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MALSSGGWAPPAPVPASSQQAACGGPALTACCTTVLMSVRVSVCHSGIRPLCLPGAGSEA
LRLQLSMDPSRAGEFRLALRDTSGNRSVFIAEFDLRSVQYEVKSPRCHEMRLAAPPHDCI
RFNFRCDREAEEWATVVMSSLREAHRVANVNTCESDGRHEDTVAAMEQWSAASLPLTEEL
CLELARAIEAGDTHAASQHASALARQKAVLTIQLSEKNYAEGEISLSVVVEDVSSSCCVT
VKVFPYMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQKNGDTAYLYLIS
ARQARITRQLFQQDLESALLAPPLPPGNGPTSQDWRGYSTLPSRLPHSSQGSTGGGGGRP
ADIKDVLEIENLQLNDHTSKASKTQQTEWACPSCTFINKPSRPGCEICATARPDAHIQQM
QMYRYLKGGRRPPKQVCFIPTAVSCFVG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagctcgggcggctgggctcctccagccccggtccctgcctcgtcccagcag
gctgcatgcggcgggcctgcgctgacggcttgctgcactactgttttaatgtcagtccgg
gtttcggtgtgccattcagggatccggcccctgtgcctccctggagctggcagcgaggct
ctgcgcctccagctcagcatggacccgagccgggccggagagttccgactggcgctgcga
gacacaagcggaaaccgcagtgtgtttattgcagagtttgacctgcgctcggtgcagtac
gaggtgaagtcccctcgctgccatgagatgcgtctcgccgctccgcctcacgactgcatc
cgcttcaacttccgctgcgaccgcgaggccgaggagtgggccaccgtggtgatgtcatcg
ctcagagaggcgcatcgagttgcaaacgttaacacatgtgaatcagatggcagacacgag
gacacggtagcagcgatggagcagtggagcgccgcatcgctgccgctcactgaggagctg
tgcttggaactcgccagggcgattgaagcaggcgatacccatgcggcttcacagcacgcg
tccgctctggctcggcaaaaagcagtgctgacgattcagctgtctgagaagaactacgca
gagggagagatcagtttatctgtggtagtggaggatgtctcgtcatcctgttgtgtcaca
gtgaaagtctttccttacatgaccgtggctgcactcaagcaacaggtgtttctcgagtat
ggtttccatcctcgcgtgcagcgctgggtgattggccagtgcttgtgcaccgagccgagg
tcgctggcctcctacggggtgcagaagaacggtgatacggcgtacctctacctgatctcc
gcccgacaagcccgcatcacccgtcagctgttccagcaggacctggagagcgccctcctt
gcgccaccgctcccaccgggcaacggcccaacctcccaagactggaggggttacagcacc
ctgccctcaaggctgccccacagcagccaggggagcacaggtggaggaggcggtagacca
gctgatatcaaagatgttctggagatcgagaatctgcagctgaacgatcataccagcaaa
gccagtaaaacacagcagacagagtgggcttgtccctcatgcactttcatcaacaagcct
tcccgtccaggctgtgaaatctgcgctacagcccgacctgacgcacacatccagcagatg
cagatgtacagatatcttaaaggaggcagacgaccacccaaacaggtatgtttcattcca
acagctgtttcctgttttgtcggttag
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