KEGG   Etheostoma spectabile (orangethroat darter): 116702065
Entry
116702065         CDS       T08457                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
esp  Etheostoma spectabile (orangethroat darter)
Pathway
esp04010  MAPK signaling pathway
esp04060  Cytokine-cytokine receptor interaction
esp04150  mTOR signaling pathway
esp04210  Apoptosis
esp04217  Necroptosis
esp04350  TGF-beta signaling pathway
esp04620  Toll-like receptor signaling pathway
esp04621  NOD-like receptor signaling pathway
esp04622  RIG-I-like receptor signaling pathway
esp04625  C-type lectin receptor signaling pathway
esp04920  Adipocytokine signaling pathway
esp05132  Salmonella infection
esp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:esp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    116702065
   04350 TGF-beta signaling pathway
    116702065
   04150 mTOR signaling pathway
    116702065
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    116702065
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    116702065
   04217 Necroptosis
    116702065
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    116702065
   04621 NOD-like receptor signaling pathway
    116702065
   04622 RIG-I-like receptor signaling pathway
    116702065
   04625 C-type lectin receptor signaling pathway
    116702065
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    116702065
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    116702065
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116702065
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:esp04052]
    116702065
   00536 Glycosaminoglycan binding proteins [BR:esp00536]
    116702065
Cytokines and neuropeptides [BR:esp04052]
 Cytokines
  Tumor necrosis fators
   116702065
Glycosaminoglycan binding proteins [BR:esp00536]
 Heparan sulfate / Heparin
  Cytokines
   116702065
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 116702065
NCBI-ProteinID: XP_032392039
LinkDB
Position
14:complement(23309454..23311897)
AA seq 241 aa
MEGECKVLLDAAVDTEARTQTLRVKPSSKLTTALLVFTLCLAAAAAAVLIVNRHAKGPGP
DEDNFDLHHTLRQISNVRAAIHLEGEYNPDRKTSVEWKKDVDQSHFQGGLELNNNEIIIP
RKGLYFVYSQASFRVNCVSDDDDYTSKSMVHLSHTVKRWSKSYGADDSIKSYQTILHSVR
TACQKNSNSQLDEEGSWFSAVYMGAVFNLNEGDRLKTMMEEKMLQDLEDGPGKTFFGVFA
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atggaaggggaatgcaaggtactactggacgcagctgtggacacagaagccaggacacag
acactgcgagtcaaacccagctcaaagctaaccacagccctgctggtgttcacactctgc
ctcgctgctgctgctgctgctgtcctcatcgtcaacaggcatgccaagggcccaggacca
gatgaagacaattttgatcttcatcacacattgaggcaaatttcaaatgtcagagcggcc
attcatttagaaggagaatacaaccctgacaggaaaacatcagtggaatggaagaaggat
gtggaccagtcccactttcaaggagggctagaactcaacaacaatgaaattattattcct
cgaaagggcctctactttgtttacagccaagcgtctttccgggtaaactgcgtcagcgat
gatgatgactacacctcaaagtccatggtccacctgagccacactgtgaagcgctggtcc
aaatcgtatggggccgacgactccataaagtcctaccagaccatcctgcactctgtccgt
actgcctgccaaaagaattccaacagccagctagatgaggaggggagctggttctcggct
gtgtacatgggagctgtgttcaacctgaacgaaggagacagactcaagacgatgatggaa
gagaagatgctgcaggacctggaggatgggccagggaagactttcttcggtgtgtttgcc
ttatga

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