Etheostoma spectabile (orangethroat darter): 116703151
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Entry
116703151 CDS
T08457
Symbol
pdgfa
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04010
MAPK signaling pathway
esp04020
Calcium signaling pathway
esp04510
Focal adhesion
esp04540
Gap junction
esp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116703151 (pdgfa)
04020 Calcium signaling pathway
116703151 (pdgfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116703151 (pdgfa)
04540 Gap junction
116703151 (pdgfa)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116703151 (pdgfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
esp04052
]
116703151 (pdgfa)
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116703151 (pdgfa)
Cytokines and neuropeptides [BR:
esp04052
]
Cytokines
Growth factors (RTK binding)
116703151 (pdgfa)
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Growth factors/receptors
116703151 (pdgfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
116703151
NCBI-ProteinID:
XP_032393672
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All DBs
Position
15:complement(8625099..8644267)
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AA seq
228 aa
AA seq
DB search
MRAALCYFLLWTTYLLLATSEEVEFPQELIDRLSHSEIHSISDLQRLLDIDSVGTGNNVI
EEPKHHKHHNHHKNYSRQHGYYNDLKSSQLHSRRKRSIVEEAVPAVCKTRTVIYEIPRSQ
VDPTSANFLIWPPCVEVLRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRRPKLKEVFV
RLEDHLECVCTSQHHVVEHSDAETGHHRAKGKKRKPKKLRPSKDLLAT
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcactttgttacttcctgctgtggacgacgtacctgctgctggccacctct
gaggaagtggagtttccccaggagctgatagacagactgtcccacagtgaaatccacagc
atcagcgacctccagcggctactagacattgactccgtaggtacgggaaacaatgttatc
gaggagcccaaacaccacaaacaccacaaccaccataagaactactcccgccagcatggt
tactacaatgacctgaagagctcccagctccacagccgacgcaagaggagcattgtagag
gaggcggtcccagcggtgtgtaagacgcggacggtgatctacgagattcccaggagccag
gtggatcccacgtctgccaacttcttgatatggccgccatgtgtcgaggtgctgcgctgc
acaggctgctgcaacacaagcaacatgcgctgtcacccttcccgcaagcaccaccgcacc
gttaaggtagcaaaggtggagtacgtgaggaggagacccaagctgaaagaggtctttgtg
cgattagaagaccacctggagtgtgtgtgcacatcacagcatcacgtggtggagcactca
gatgcagaaacaggccaccatagggctaaaggtaaaaaaaggaaacctaaaaagctaagg
cccagcaaggatttattggcgacataa
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