Etheostoma spectabile (orangethroat darter): 116703165
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Entry
116703165 CDS
T08457
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116703165 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116703165 (eftud2)
Spliceosome [BR:
esp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
116703165 (eftud2)
Complex C
U5 SnRNP specific factors
116703165 (eftud2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
116703165
NCBI-ProteinID:
XP_032393696
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Position
15:15071819..15084361
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AA seq
850 aa
AA seq
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MDGPELIRNITLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGIK
STPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRISDGVVLFIDAAEGVMLNTERL
IKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVSP
LLGNVCFASSQYSICFTLGSFAKIYSDTHGDINYNEFAQRLWGDIYFNPKTRKFTKKAPS
SNSQRSFVEFVLEPLYKILSQVVGDCDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCNR
FFGEFTGFVDMCVHHIPSPQEGARNKIEHTYAGGMDSDLGEAMAECDPDGPLMCHTTKMY
STEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTLGRLWISVARYQIEVN
RVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNIASVIKIAVEPVNPSELPK
MLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTF
CETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKY
DWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDE
PIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADC
VSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVFH
HWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELA
KQDVVLNYPL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggacggtcctgagctaatccgtaacatcaccctgtgtggtcaccttcaccacggcaag
acctgttttgtggactgcctgattgaacagacgcacccagaaatcaggaaaagagatgat
gtggatctccgttacacagacatcctctttacagaacaggagagaggagttggtatcaag
agcacccctgtcacaatggtcctaccagactccaggggcaaatcctaccttttcaacatc
atggatacaccaggccacgtaaacttctctgacgaggtcacatccagcatccggatctca
gacggtgttgtcctcttcatagacgcagcagaaggagtgatgctgaacaccgagcgcctg
atcaaacatgcagttcaggagcgtatggccatcaccatctgcatcaacaaggtggaccgg
ctcattgtggagctcaaattgcctcccacagatgcttattataaacttcgtcacattgtg
gatgaggtcaatggtttgctcagcacatactcaacagacgagaacttggtggtgtctcct
ctccttggaaatgtgtgcttcgccagctctcagtacagcatctgtttcactctgggttcc
tttgcaaagatctactcagacacccatggtgacatcaactataatgagtttgcccagagg
ctttggggagacatatatttcaaccccaaaactcgcaagttcacaaagaaagctcccagc
agtaactctcagcgcagcttcgtggaatttgtcctggagcccctctacaagatcctctca
caggtggttggggattgtgacacatctctccccagagttctggatgagttggggatccac
ctgactaaagaggaactgaagctgaacatcagacccttactgaggctggtctgtaaccgc
ttctttggagagttcactggctttgtggacatgtgtgtacaccacatcccctcaccacag
gagggtgctcggaacaagatagagcacacatacgctggaggtatggactcagaccttggg
gaggccatggcagagtgcgaccctgatggtcctttgatgtgccacaccactaagatgtac
agcacagaggatggggttcagttccatgcctttggcagggtgctgagtgggaccattcag
gcaggtcagcctgtcaaggttttaggagagaactacacccttgaagatgaagaggactcc
caggtctgcactttgggccgtctctggatttcagttgccagataccaaattgaagtgaac
cgagtgccagcaggcaactgggttctcattgaaggttgtgaccagccaatcgtcaagacc
gccacaatcacagagcccagagggaatgaagaggctcagattttcaggccactgaagttc
aacatagcatcggttataaagattgcagtggagcctgtcaacccatcagagctgccgaaa
atgttggacggactaaggaaggtcaacaaaagctatccgtctctcaccacaaaggtggag
gaatctggagagcatgttatcttggggacaggagagctctacctggactgtgtcatgcac
gacctgcgaaagatgtactctgagatcgacattaaagttgctgaccctgttgtgactttc
tgtgaaacggttgtggaaacatcatcactcaagtgcttcgctgaaacgcctaacaaaaag
aataagatcactatgattgctgagcccttggagaaggggctggctgaggacatagagaac
gaagtggtgcagatcacatggaacaggaagaagctgggagagtttttccaaacgaagtac
gactgggatctgctggctgccaggtccatctgggccttcggaccagacaccacgggacca
aacatccttgtagacgacacactgccctccgaggtggacaaggcgctgctcggctcagtc
aaagacagcatagttcagggcttccagtggggcaccagggaggggccgctgtgtgatgag
cccatcaggaatgtcaagtttaagatccttgacgcagtcattgctcaggagcctctccac
cgaggagggggccaggttatccctacagccaggagagtggtgtactcggctttcctcatg
gccactccaaggttgatggagccttattactttgtggaggttcaggctccagctgattgt
gtatctgccgtctacacagtgctggctcgtagaaggggtcatgtcacccaggatgctcct
attccagggtctcctctctacaccattaaggctttcatcccggccatcgactcctttggc
tttgagacagatcttcgcactcatacacagggacaggcctttgctctgtctgtgttccac
cactggcagattgtccctggtgaccctttagacaagagtatagtgatcaggcctcttgag
cctcagcccgccccccacctggccagagagttcatgatcaagacccgaaggcgcaagggt
ctgagcgaggatgtgagcatcagcaagttcttcgacgatcctatgttgttggagctggcc
aaacaggacgtggtgctaaactaccccctgtga
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