Etheostoma spectabile (orangethroat darter): 116704755
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Entry
116704755 CDS
T08457
Name
(RefSeq) H-2 class I histocompatibility antigen, Q10 alpha chain-like
KO
K06751
MHC class I antigen
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04144
Endocytosis
esp04145
Phagosome
esp04218
Cellular senescence
esp04514
Cell adhesion molecule (CAM) interaction
esp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116704755
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116704755
04145 Phagosome
116704755
09143 Cell growth and death
04218 Cellular senescence
116704755
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116704755
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116704755
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
esp00537
]
116704755
Exosome [BR:
esp04147
]
Exosomal proteins
Proteins found in most exosomes
116704755
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
esp00537
]
Antigens
116704755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
Presenilin
CENP-T_C
Motif
Other DBs
NCBI-GeneID:
116704755
NCBI-ProteinID:
XP_032396249
LinkDB
All DBs
Position
16:complement(28308026..28323994)
Genome browser
AA seq
536 aa
AA seq
DB search
MSFVAVFVLLGTGLAVNCETHSLTYIYTAFSKPVGLPGIHEFTAMGLLNDRMIDYFDNDL
QKKVPKQYWMEQKLPADYWVKGTQSRQSKQQWFKVNIDILKNRMRQNDTDVHVLQWMHGC
KGVMKDGKMEFVRGTDMYSYDGNDFLSFDDSNSVWVAPTDAAVQTKRKWDEVQVLKEYTK
GYLENECIDWLEKFVNYGQKQLQEAIPPKVHLFTRNTKVDANIRLTCLATGFLPKEITLR
MKRNSRILTPQDGVESSGVRPNGDGTFQRRDGVEILRSDLSTYTCEVIHQASNLHVEEEW
DHKVPDQTGGIIGGAIGALILILILVGVAVMLVVLYKKGIIKKPSSSPTSSHQQFTGAFP
HLCKDGIRIVPLQKVFDMGQTPPSKPLGVDFTGRRRGRPSSTGVNSNETGPAGGVSIPPT
RPGPLTLGNWSRTESPPTRRGGVPVPGRSAPPGLGLEAPDPLPPPLWRAPDPSGSSQNGS
PWVEWGAPVLGLCPPGVRGKPGHQALLTTPRLGRPRGGPRPPGRGIPLFLGSHRVF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgtcgcggtttttgtccttttggggacaggactggcggtaaactgcgagact
cattccctcacctacatctacacggccttctccaaacccgtgggcctcccgggcatccac
gagtttacggccatgggtctgctgaacgaccggatgatcgactacttcgacaacgacctc
cagaagaaggtccccaagcagtactggatggagcagaagctccctgcagactactgggtc
aaagggacccagtcccgccagagcaaacagcagtggttcaaggtcaacatcgacatcctg
aagaaccgcatgagacagaacgacacggatgtccatgtcctccagtggatgcacggctgc
aaaggggtaatgaaggacggcaagatggagttcgttcgaggcacggacatgtacagctac
gacggaaacgacttcctgtcatttgacgacagcaacagcgtctgggtcgccccaactgac
gccgcggtccagaccaagaggaagtgggacgaggtccaggtcctgaaggaatacaccaaa
ggctacctggagaacgagtgcatcgattggttggagaagttcgtaaattatggacaaaag
cagctccaagaagccatccccccgaaggtgcacctgttcaccaggaacaccaaagttgac
gccaacatccgcctgacgtgcctggccacgggtttcctacccaaagagatcacgctgcgc
atgaagaggaacagccgcatcctgactccccaggacggggtggagtccagcggcgtgcgt
cccaacggggacggcaccttccagagacgggacggcgtggagattctccggagcgacctg
tccacctacacctgcgaggtgatccatcaggcgtccaacctacacgtggaggaggagtgg
gatcataaagttcctgaccagactggaggaatcatcgggggggcgatcggagccttgatc
ttgatcttgatcctggtcggggtcgcggtgatgctggtcgtcttgtacaaaaaagggatt
attaaaaaaccttccagcagcccaacgagcagtcatcaacaatttacgggagcatttccc
cacctctgtaaagacggaatccgcattgttcctcttcaaaaggttttcgacatgggccaa
acccctccttccaaaccccttggagtagactttacagggaggcgtagggggcgaccctcc
tccaccggggtaaactccaacgaaacggggccagccgggggtgtgagtatcccccccacc
cgccccgggcctctcaccctggggaactggagtaggacagagtccccccctaccaggagg
gggggcgttccagtccccggccgctctgcccccccgggtctgggcctcgaggcccctgac
cctttgccgccacccctatggcgcgcacccgaccccagcggttcctcccaaaatgggagc
ccctgggtggaatggggggccccggttcttgggctgtgcccacccggggtccgtggcaaa
cccggccaccaggcgctgctgacgaccccccgtctgggccggcccagagggggcccccgg
ccccccgggaggggcatccctctcttcctcggctctcatagggttttttaa
DBGET
integrated database retrieval system
