Etheostoma spectabile (orangethroat darter): 116704929
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Entry
116704929 CDS
T08457
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp00900
Terpenoid backbone biosynthesis
esp01100
Metabolic pathways
Module
esp_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
116704929 (ggps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
esp01006
]
116704929 (ggps1)
Enzymes [BR:
esp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
116704929 (ggps1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
116704929 (ggps1)
2.5.1.29 geranylgeranyl diphosphate synthase
116704929 (ggps1)
Prenyltransferases [BR:
esp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
116704929 (ggps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
116704929
NCBI-ProteinID:
XP_032396589
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All DBs
Position
17:18061330..18074857
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AA seq
315 aa
AA seq
DB search
MDGNLEATSERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIQVTEMLHNA
SLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLEHPEAVRVFTRQL
LELHRGQGLDIHWRDTYTCPTEQEYRNMVLQKTGGLFGLAVGLMQLFSDWKQDLKPLLDT
LGLFFQIRDDYANLSSREYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTE
NMDIKRYCVDYLEKVGSFAYTRQTLRDLEAEVYRLIGEFGGNPQLESLVKHLSQMHREAE
ATAESSTEPDSNQNH
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaacttggaagccacctcggagcgaattctgctggaaccgtacaagtacttg
ttgcaattaccaggaaagcaggtgaggacaaaactatcccaagcatttaaccactggctc
aatgttccagaggacaaactgcaggtgatcatccaggtgactgagatgctgcacaatgcc
agcttgctcattgacgacattgaggacagctccaagctgcgacgaggcttccctgtggcc
cacagcatctatggcattccatcagttatcaactcggcaaactacgtctacttcctgggg
ttagagaaggtgctcaccctggagcaccctgaggctgtccgagtgtttacccggcagctg
ctggagctgcaccgtggtcagggcctggacatccactggagggacacctacacctgtccc
actgagcaggagtaccgcaacatggtgctacagaaaactggagggctctttggtctggct
gtaggcctaatgcagctcttctcagattggaaacaggacctgaaacccctcctggacaca
ctgggcctcttcttccagatacgcgacgactatgctaacctgagctctcgtgagtacagc
gagaacaagagcttctgtgaggacctgactgagggaaagttctctttccccaccattcac
gccatatggtcgcgtccagagagcactcaggtgcagaacatcctgaggcagcgcacagag
aacatggacatcaaacgatactgtgtggactacctggagaaggttggctcgtttgcctac
acccgtcagactctgcgagacctggaggcggaggtctaccgcctcattggggagtttggg
ggaaaccctcaactggagagccttgtcaaacacctcagccaaatgcaccgtgaggctgaa
gccacagcagagtccagtactgagccagactccaaccaaaaccactga
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