Etheostoma spectabile (orangethroat darter): 116705091
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Entry
116705091 CDS
T08457
Symbol
tnfaip3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04217
Necroptosis
esp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
116705091 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116705091 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
esp01002
]
116705091 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116705091 (tnfaip3)
Enzymes [BR:
esp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116705091 (tnfaip3)
Peptidases and inhibitors [BR:
esp01002
]
Cysteine peptidases
Family C64
116705091 (tnfaip3)
Ubiquitin system [BR:
esp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
116705091 (tnfaip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
116705091
NCBI-ProteinID:
XP_032396842
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All DBs
Position
17:6997135..7007555
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AA seq
835 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAVKIRQRVPNDVVKPAATSCLMHHLRGMHRYTLEMIAMNHF
PQAFREVVQAAILDRAMQASLEQEKKLNWCREVKKMVPLRTNGDGNCLLHAASQYMLGVQ
DTDLVLRKALHGVLKETDTGVFRARFQAELLQSQEFTQTGLRYTTMNWEEEWEKIVKMAS
PVSSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVVRSMKSGSSISPLNVGGIYLPLHW
PPTECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGGFEELKVHFLMEKEQQQ
KERLLKDYLLLIEIPVIGLGYDATRIINAARLDEGNLPEDMNLMEDYLQLVNHEYQRWQE
DKEQAWAAQPQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQATTGGGM
RIEGVVQTKGGGVQGGVGVVGGSETEVSSRGARSSSPPSSSSGRVVVISSPRSAPPTAPS
LSLYSETHAMKCKTPGCLFTLSVEHDGLCERCFNSRQNHGPPGAGTAAPGLPGPNGGATV
PHPAQGSGWTQWGGCETETERCSMCRQEAFRIFNGLCPPCMQRPQPPERGEPQQNNPRTE
ASSSAWTQARDTERPCLTLTPGHTSAWQAPLARPCKRSGCQFFGTPEKLGFCTICYVDYQ
TNHHLTPPPAPVQSRHVVEAGFQNTSRCRGPGCGAVGKAMLEGYCDKCYVKEQSTRLNQV
AHRTPHSPPLVMRDRAAKPRSSQQSQTQTQTQTQTQTQTQTQCRRSGCSNVSPGCTDLCP
ECHTRGQGREAGRRAQAPKEKSKQRCRTQGCDHYANQEKQGYCNECDHFKQIYRG
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagggtcagaacttcctccccaaatttctgtttgtctccaacctgctgaaggcc
gtgaagatccgtcaaagagtgcccaacgacgtggtgaagccggctgccaccagttgcctg
atgcaccacctgcggggtatgcaccgttacacgctcgagatgatagccatgaaccacttc
ccacaggccttcagggaggttgtgcaggccgccatcctggaccgagccatgcaggcctca
ttggagcaggagaagaaactcaactggtgtcgggaagtgaagaaaatggtacccttacgt
accaatggagatgggaactgtttgctccacgcggcctctcagtacatgctgggcgttcag
gacaccgacctggtgcttcggaaagccctccatggtgttttgaaagagacagacactggc
gtcttcagagctcgctttcaggcagagctcctccagtcccaggagttcacccagactgga
ctccgatacaccaccatgaactgggaggaggagtgggaaaagattgtgaagatggcgtcc
ccggtctccagtagtaacggcctccagtttgactctctggaagacattcacattttcgtc
ctctccaacattctccgcagacccatcatcgtcatcgcagaccaggtggtcaggagtatg
aaatctggctcctccatctctcctctgaatgtgggtgggatttatctgccgctacactgg
ccgcccacagaatgctacaaataccctatagtgcttggctacgactcgcagcactttgca
cccctcatcaccatcaaagacagcggtccagagatccgagcagtaccgctgataaaccca
ggacgagggggctttgaggagctgaaggttcactttttaatggagaaagaacagcaacag
aaagagaggcttctcaaagactacctgctattgatagagatccccgtcataggcttaggc
tacgacgccacacggatcatcaatgctgcacggctggatgagggcaaccttcctgaagac
atgaacctgatggaggactacctgcagcttgtcaaccatgagtaccagcgctggcaggag
gacaaggagcaggcatgggctgcccagccgcagcgcccaccgcccttctccgtctcccag
ctctctctcatcgaaatccgttgtgccacaccgcgatgcactttctatgtctctgtggac
acccagcctcattgccatgaatgctttgagaagcgacaggccactactggtggaggaatg
aggatagaaggggtggtgcagaccaagggaggaggggtgcaaggtggggtaggagtggta
gggggatcagagactgaggttagctccagaggagcccgaagcagcagtcccccatcctcc
tcgtctgggagagtggtggtgatttccagccctcgctcagccccacccaccgcacctagc
ctcagcctgtacagtgaaactcatgccatgaagtgcaagacacccggctgcctctttacc
ttaagtgtggagcatgatggactttgcgagcgctgctttaactccaggcaaaaccatgga
ccccctggagctggaacagctgctccaggactcccaggccccaatgggggggctacagtc
ccacacccagcccagggatctggctggacgcagtggggtggctgcgaaacagagacagag
cgctgcagtatgtgcagacaggaggcgttcaggatattcaatggcctgtgcccaccctgc
atgcagagaccgcagcctccagagaggggagagccacagcagaacaaccccaggactgaa
gcttcgtcttcagcttggacccaggcccgggacactgagcggccgtgcctcaccctaacc
ccagggcacacctcagcctggcaagcccctctggcccggccttgtaaaagatctgggtgc
cagttctttgggacgccagagaagttgggtttctgcactatttgctacgtagactatcag
accaaccaccacctgacccctccccctgccccagtccagagccggcatgttgttgaggca
ggttttcagaacacctcacggtgtcgtgggcccgggtgtggtgcagtgggcaaggcaatg
ttggagggctactgcgacaagtgctacgtcaaagagcaaagcacacggctcaaccaagtt
gcacatcgcacaccacactcccctcctctggtcatgcgtgaccgagcagccaaacccaga
tcttcgcagcaatcccaaacccagacccagacccagacccagacccagacccagactcag
actcagtgccggcggagtggatgcagtaatgtgtccccgggttgcacagacctctgccca
gagtgccacacacgtggccagggcagagaggcaggcagaagggcacaggcacctaaagaa
aagtccaagcagcggtgcaggacgcagggctgtgaccactacgccaaccaagagaaacag
ggctactgcaacgagtgtgatcacttcaaacagatttaccgcggctga
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