Etheostoma spectabile (orangethroat darter): 116705501
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Entry
116705501 CDS
T08457
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1-like
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116705501
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116705501
Domain-containing proteins not elsewhere classified [BR:
esp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
116705501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
TB
cEGF
EGF
hEGF
EGF_3
Plasmod_Pvs28
FXa_inhibition
EGF_MSP1_1
EGF_PEAR1L
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
116705501
NCBI-ProteinID:
XP_032397594
LinkDB
All DBs
Position
17:complement(21954758..22122719)
Genome browser
AA seq
1624 aa
AA seq
DB search
MAWIRWGLLFSFGLLVSPVCVAAEQQSHSGFRRLYVLQPGPGPGSGPGAGPGAAGANGGV
RVSSISTRHGAAGQPHTYNVELTASFGGQVRTRRMGNQVASAPQQSPQQLLKLSGVNVCG
GQCCHGWTKAQGSQRCTQPNCIPQCQNGGMCLRPQLCVCKPGSKGKACEQKTMPTHPFPA
LPGNGHTTANSNGHSNGHNVVPQRPIPQHVSPSGYPSGPAPSDSMAQRKLGVRPAPQFVR
PHYIQQHIQQQIRPMHPGQSQQYVIKPKYYQTHTTHTQTHVQSQPERPIPLTVAHNPIHV
GNHTGRIKVVFTPTICKVTCTGGRCHNNCELGNTTTIISENGRATDTLTAPNFRVVVCHL
PCMNGGKCSTRDKCQCPPDFTGKFCQMAVENGQQQPSGGYSQTQVHSTHTLPLTYSNGHN
PVFSPSIVNIHIKHPPEASVQSTRFPSWTTTTTSGTSSKLPRQAPLPLPATHTSTQRAQK
IQQHGYNMLYHPASMATASQLQEQPWAAASRKQQGVSVEKRCQVSLSRSSAVDHRDVLGF
PQMPEVSKKQCYYHWDAELEFSRVTAAGKKLPLNLLVRVQRDLSRLPDLSADVSLVPPVF
SPSIVNIHIKHPPEASVQVHQVSQLDNYHNIGHQLKASQAGSSSSTSYTYQHSESSQKIQ
QHGYNMLYPSQHGYQPVSSKNTLGRCFQETAGSQCGKALPGLTKQEQCCGTIGTSWGFHK
CQKCPKKQSIPLIDCPQGYKRINSSHCQDFDECQLQGACPNGNCLNTVGSYRCMCKPGFV
PDPTLTTCISNTPAIQEEKGACFRLVSSGRQCLHPVSTQLSKQLCCCSVGKAWGPRCDKC
PPQGTAKFKDICPGGMGYTVLPNPPVNKPVTVHQAPMEPLPLQPLPTPERPVEAFGKPEE
SIPVATAAPDEELVVPVVSDRPVIEPILPQLSPGVSTVKIEAAYPEVVERSSPPEPVEIL
PSNAGQDIAPTQSAEVDECQINPYICGQGICYNTAEGYTCHCDDGYHLDDTQSTCEDVDE
CLESPSLCYGGRCKNTEGSFLCVCAQGFLLDKEGTTCVDVDECQDEQICTRGHCQNTDGS
FLCQCGPGFTLSPAGDRCDDVDECVEEPKPCEAVGQCVNNMGSYSCNCPRGYRQINGTRC
TDIDECGLNETLCGPHGYCENRLGSFQCLCDQGYHESLDGQACVDVNECELLSSVCGEAQ
CVNADGSFLCVCPSGQDYNVMIAKCEPIPTVSSVEHKECYYRLNDENLCESVLTSHVTLQ
ECCCTLGAGWGDNCEVYPCPVNGTDQFDQMCPSGRGFIPNGDILYGVATADSYKDADECA
LFGQEVCKGGFCLDTVGSYECYCKTGQDYDAANLQCTDMDECLDESLCAGGQCMNTVGSY
MCFCTQPMVLDPSSNRCVFIPEGAEQHEAEQTVYQGICWQTVTQSMTCMRPLGPDRKTTY
TECCCLYGEAWGMDCALCPFRNTEDYASMCNLGGRRPYGHDALVAGPNHEYEVSPDYSPL
PDPVLPFYDNEESPFKAFEGLRAEECGILNGCENGRCVRVEEGYTCDCFDGYTLDLSRMA
CIDVNECSELNTRMSLCKNAKCINTVGSYQCVCLPGFVASDKPNYCVAPATHETATHTGS
MDRH
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatcagatggggcctcttgttttcgttcggtttgcttgtctctccggtatgt
gtggcagcggagcagcagagccacagcggcttcaggagactgtacgtgctgcagccgggg
cccgggcccggatcggggccgggggctgggccgggggcggccggagccaacggtggggtg
cgagtcagctccatctcgacgcgtcacggcgctgcagggcagccgcacacgtacaacgtg
gagctcaccgccagcttcggcggtcaagtccggactcgcaggatggggaaccaggtggct
tcagccccgcagcagagcccgcagcagctcctcaagctgtctggggtgaatgtctgtgga
ggccagtgctgtcatggatggactaaagctcagggctcgcagcggtgcacacagcccaac
tgcatccctcaatgccagaatggaggaatgtgcctcaggcctcagctctgcgtctgcaag
cctggctcaaaggggaaggcatgcgagcagaagacgatgcccacacaccccttcccagcc
ctgcctgggaacgggcacaccactgctaactccaacggacactctaatggacacaacgtg
gtgccccagcggcccatacctcagcacgtttctcccagtggttatccctctgggcccgct
ccatctgacagcatggcccagaggaaactaggtgtcaggccggccccccagtttgtacgt
ccacattacatccaacagcacatccaacagcagatccggcccatgcacccaggtcagagc
cagcagtatgttataaagcccaaatactaccaaacacacaccacacacacacagacgcac
gtccagtcccaacctgagaggcccatccccctgacagtggcacacaaccccatccatgta
ggcaaccatacaggacggatcaaggtggtgttcactccaaccatctgcaaggtaacctgc
acgggggggcgatgtcacaacaactgtgagctgggaaacaccaccaccatcatcagtgag
aacggccgtgctaccgacaccctgacagcccccaacttcagagtagtggtgtgtcacctc
ccgtgtatgaatggcgggaagtgcagcaccagggacaagtgtcagtgcccccccgatttt
actggaaagttctgccagatggctgttgagaacggccagcagcagccatcaggcggctac
agccagactcaagtccactccacacacaccctgcctctaacctacagcaacggccacaat
cccgtgttcagccccagcattgtcaacatccacattaagcatccccctgaagcctcggtc
cagtccaccaggtttcccagctggacaactaccacaacatcgggcaccagctcaaagctt
cccaggcaggctcctcttcctctaccagctacacataccagcactcagagagcccagaag
atccagcagcacggctacaacatgctttaccacccagccagcatggctaccgccagtcag
ctccaagaacaaccctgggccgctgcttccaggaaacagcagggagtcagtgtggaaaag
cgctgccaggtctcactaagcaggagcagtgctgtggaccatcgggacgtcctggggttt
ccacaaatgccagaagtgtccaagaaacaatgttattatcactgggatgccgagttagag
ttcagtagggtgacagctgcaggaaagaagcttcctctgaacctgctggtgcgggtgcag
agagacctgagccgcctcccggacttgtctgctgatgtgtcccttgtgcctccagtgttc
agccccagcattgtcaacatccacattaagcatccccctgaagcctcggtccaggtccac
caggtgtcccagctggacaactaccacaacatcgggcaccagctcaaagcttcccaggca
ggctcctcttcctctaccagctacacataccagcactcagagagcagccagaagatccag
cagcacggctacaacatgctttaccccagccagcatggctaccagccagtcagctccaag
aacaccctgggccgctgcttccaggaaacagcagggagtcagtgtggaaaagcgctgcca
ggtctcactaagcaggagcagtgctgtgggaccatcgggacgtcctggggtttccacaaa
tgccagaagtgtccaaagaaacaatctatccctctgatagattgtcctcagggttacaag
agaatcaacagctctcattgccaagatttcgatgagtgccagctgcagggggcgtgtcct
aatgggaactgtctgaacactgtgggcagctataggtgcatgtgtaaacccggctttgtt
cctgaccccacactcaccacttgcatatccaacacgcctgccatccaagaggagaagggg
gcttgcttccgtttggtgagctcagggaggcagtgtttgcacccagtgtctacccaactg
agcaaacagctctgctgctgcagtgttggcaaggcctggggccctcgctgtgacaaatgc
cctcctcaaggaacagctaagttcaaagacatctgtcctggtggaatgggctacactgtt
ctaccaaatccgcctgtcaataagccagtcaccgttcaccaggcacccatggagcctcta
cccctccaacccctgccaacaccagagagaccagtggaagcttttgggaaaccagaagag
agtataccagtagcaacagctgcaccagatgaggagctggtagttcctgtggttagtgat
aggccagtaattgaacccatcctgccccagctatctccgggtgtatctactgtcaagatc
gaggcagcctacccagaggttgttgagaggagctctccacccgaaccagtggagatcctg
ccatctaatgcaggccaggacatcgcccccacccagtcagctgaggtggatgagtgccag
atcaacccttatatttgtggccaggggatttgttacaacacagcagagggttacacctgc
cactgtgatgatggataccacctggatgacacccagtccacctgtgaagatgtagatgag
tgtttggaaagcccatctttgtgctatggcggtcgctgcaagaacacagagggcagtttt
ctgtgtgtgtgcgcgcagggattcctcctggataaagaaggaaccacttgtgttgatgtt
gatgagtgccaggatgagcagatctgtacccggggccactgccagaacactgacggctcc
tttctgtgtcagtgtggccccggcttcaccctgtccccggctggagaccgctgtgatgat
gtggatgagtgtgtagaagagcccaagccctgtgaggccgtaggccagtgtgtcaacaac
atgggctcatacagctgcaactgcccccgggggtaccggcaaatcaacggcacccgctgc
acagatattgatgagtgtgggctcaatgagacgctgtgtggccctcatggctactgtgag
aacagactgggctccttccaatgcctctgtgaccagggctaccacgagtccctggatggc
caagcctgtgtggatgtgaacgagtgtgagctgctgagcagtgtgtgtggagaggcccag
tgtgtgaacgctgatggttccttcctctgcgtgtgtcccagcggccaggactataacgtc
atgatcgccaagtgtgaacccattcccacagtgtcatcagtggagcataaggagtgctac
taccgtctgaacgatgaaaacctgtgtgagagtgtgctgaccagccatgtcaccctgcaa
gagtgctgctgcactctgggagctggctggggggacaactgtgaggtgtacccctgtcct
gtcaatggcacagaccagtttgatcagatgtgtccgtctggaagaggatttattcctaat
ggagacatcctgtatggtgtggccacagctgacagctacaaagatgcagatgagtgtgct
ctgtttggccaggaggtttgtaaaggaggcttctgtctggacactgtgggcagctacgag
tgttactgtaagacgggacaagactacgacgctgccaatctgcagtgcacagacatggat
gagtgtctggatgagtctctgtgtgctggtggacagtgtatgaacacagttggctcgtac
atgtgtttctgtacccagcctatggtgctggatcccagcagtaaccgctgtgtcttcatt
cctgagggggctgagcaacatgaggcggagcagacggtctaccaagggatctgctggcag
acggtgacacagagcatgacatgcatgcggccgttgggtcccgacaggaagaccacttac
acagagtgttgctgtctgtacggcgaggcatggggcatggactgtgccctgtgccccttt
aggaacactgaggattatgcgtccatgtgtaaccttggcgggcggcggccatacggtcat
gacgcccttgttgctggccccaaccatgaatatgaagtgagcccagactattccccatta
cctgatcctgtcctgcctttttacgacaatgaagagtctccattcaaggcctttgagggt
ttgcgagcagaggagtgtggtatactgaatggctgtgagaacggtcggtgcgtccgggtt
gaggagggttacacctgcgactgctttgatggatacaccctggacctgtcccgcatggcc
tgcattgatgtgaacgagtgctcagagctaaacacccggatgtcgttgtgtaaaaatgct
aagtgcatcaacacagtgggctcctatcagtgtgtgtgtctgccaggctttgttgcctct
gacaaacccaactactgtgtggccccagcaacacatgaaacagcaacacacacagggagc
atggacagacactag
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