Etheostoma spectabile (orangethroat darter): 116706030
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Entry
116706030 CDS
T08457
Symbol
otof
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116706030 (otof)
Membrane trafficking [BR:
esp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116706030 (otof)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
116706030
NCBI-ProteinID:
XP_032398452
LinkDB
All DBs
Position
18:10245270..10316989
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AA seq
2052 aa
AA seq
DB search
MMALMVHLKTVAHLRGKGDRIAKVTFRGLSFYSRVAENCEEVAHFNEVFRWPIASKLDGN
EMLEIQVYNYSKVFSNRLVGTFCMVLQKVAEEGHLELTDTLIDDNNTSIKTSVTIDIRYQ
SMDGTVGVWSDGEFLDVPDDRDGMFAFETDSLLSGQSHGSGTSPGRSLQGSIPTFRKAGK
GVFSAMKLGKIKSSKDDHKRGDEPAVLDMEDLDRKAMRLAGALDPDTISLASVTAVTTNV
SNKRSKPDIKMEPSSGRPVDYQINITVIEARQLIGLNMDPVVCVEIGDDKKYTSMKESTN
CPYYNEYFVFDFHVPPEVMFDKIIKLSVIHSKNLLRSGTLVGTFKMDVGTVYSQPEHQFY
HKWAILSDPEDITAGCKGYVKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGIPVE
RQWARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVQFAGQKGKTSVQKSS
YEPIWNEQIVFTELFPPLCKRMKVQIRDSDKVNDVAIGTHFVDLRKISNEGDKGFLPTLG
PAWANMYGSTRQYTLMDEHQDLNDGLGEGVSFRARLLLSIAVEILDTTSPELMSSTEVQV
EGVSNISESATGKIDEFFLFGSFLEATMIDRKIGDKAISFEITIGNYGNQIDGVSKSLTA
KKKKKDGENEEEESDLIQNSSEDEADEDGDLVSVSSTPPMKPVITDRNYFHLPYFEKKPC
VYIKSWWQDQRRRLYNSNMMDKIADKLEEGLNDVQEIIKTEKAFPERRLRGVLEELSVGC
SRFVTLANKDVNQAGRTKLDRERLKSCMREMDSMGQQAKQIRTQVKKNTIRDKLKLVQNF
LQRLRFLADEPQHSIPDVFIWMMSNNKRIAYARIPSKDILYSIVDEETGKDCGKVKAVFL
KLPGKKGFGPAGWTVQAKLELYLWLGLNKQRKDFLSGLPNGFDEIKSTKTGPCLHSVPPV
SLVYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCPTWDQL
LVFDDVELFGEASELRDDPPIIVVEIFDQDTVGKAEFIGRAFAKPTIKMCDEHYGPPRFP
PQLEYYQIYRGNSTAGELLAAFELLQIPFDVEAIRRALIAVHNFAVPQIKVGQGGIADLP
SLEGPTDTERGPILPVPLGIRPVLSRYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGRG
VQSVLIQNYKKNPNFSILVKWFEVDLPENELLHPPLNIRVVDCRAFGRYILVGSHAVTSL
RRFIYSTPDKTSNNWATAAKLMNGYMVLANGGFQPRSSPSLSSRTLSRPAGDIIVNMDAE
PSVRKMDTVVKLDAMSDAVVKVDMTEEESDKEKKRKKKKKKGGVEEEDETNERVLDWWSK
YFASIETLKETLRAQDAAQAEAEEREDLEIAAEAADIKPDDLLLKGSKTKEKSKEKKSSK
DKKKGHAADGSEKRTVKARVDELMVYNKELDSEFGNFEDWLHTFNLYRGKAGDDDERTLD
DDRIVGRFKGSLCMYKLPLSEEITRETGFDPSMGMFQSIPHNDPINVLVRVYVVRATDLH
PADINGKADPYIVIKLGKSEIKDKENYISKQLNPVFGKSFDIEARFPMESMLTVSVYDWD
LVGTDDLIGETKIDLENRFYSKYRATCGISSNYSVHGYNVWRDPMKPSQILAKLCKDAKI
DGPHYGPGGKVKVANRIFQGPTEIEDENGLKKQTEEHLALTVLNHWEEIPRVGWKLVPEH
VETRALLNPDKPGIEQGRIEMWVDMFPMDMPAPGPAIDISPRKPKRYELRVIIWNTDEVI
LEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVFPFDYLMAEEK
IVISKKESMFSWDETEYKIPPRLTLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCS
LDMIRNEQELPTISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLVTAEEAEKSPVG
LGRNEPDPLEKPNRPDTTFLWFLSPLKAIRYLVCNRYKWLIIKIVLAALLLVMLGLFLYS
MPGYLVKKLLGA
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgatggctttaatggtccacctgaagacggtcgctcaccttcggggaaaaggtgacagg
atcgccaaagttacattcagaggtctttccttctacagccgtgtggcagagaactgtgag
gaagtggcccactttaatgaggtatttcgatggcctattgccagcaaactggatggaaac
gagatgctggagatccaagtgtacaattacagcaaggttttctcaaacagactggtgggg
actttctgtatggtgcttcagaaggtggctgaagagggacacctagagctgaccgacaca
ctcatcgacgataacaacacttcaataaagaccagtgttacaatagatattagataccag
tcgatggatggcacagtgggagtgtggagcgacggggagttcctggatgttcctgatgac
cgtgacgggatgtttgccttcgaaacagacagcctgctgtcaggacaaagccacgggtcg
ggcacgtctcctggacggtccttacagggatccatacccaccttcaggaaagcagggaag
ggagttttctcagccatgaagctcggcaagatcaagagctctaaggacgatcacaagaga
ggagatgagccagcagtcctggacatggaggacctggacaggaaggccatgcgtcttgct
ggagcactggacccagacacaatctctcttgcctctgtcaccgccgtcaccaccaacgtc
tccaataaaaggtcaaagccagatatcaagatggagccaagctctggacgcccagtggat
tatcagatcaacatcacagtgattgaggcccggcagctgataggcctcaacatggaccct
gttgtgtgtgtggagattggagacgacaagaagtacacatccatgaaggagtccaccaac
tgcccgtactacaatgagtattttgtctttgacttccacgtccctcctgaagtcatgttt
gacaagattatcaagctctccgttattcactctaaaaatcttcttcgaagtgggacattg
gtgggaaccttcaagatggatgtggggactgtttactctcagcctgaacatcaattttac
cacaagtgggccatcctatctgatcctgaagacataacagcagggtgtaaaggatatgtg
aagtgtgacattgctgtggtcgggaagggtgacaacatcaagaccccacacaaggccaac
gagaccgatgaagatgacatagagggaaacctcctgctccctgagggcatccctgtagag
aggcagtgggcgaggttttatgtgaagatctaccgtgctgagggacttcctaaaatgaac
acaagtattatggctaatgtcaagaaggccttcataggagagaaccgagacctggtggac
ccctatgttcaagtgcaatttgctgggcagaaagggaagacttcagtccagaagagcagt
tatgaaccgatctggaatgagcagatcgtgttcactgagctcttccctccactctgcaaa
cgcatgaaggtccagatacgagactcggataaggtcaacgacgttgccataggaacccac
tttgttgacctacgcaagatatcaaatgaaggtgacaaagggttcctgcccaccttgggt
ccagcttgggccaacatgtacggttccacccgtcagtacaccctgatggacgagcaccaa
gacctgaatgatggtcttggagaaggcgtgtccttcagagcccgtctcctgctttccatc
gctgtggagatcctggacaccacttcccctgaactcatgagctccactgaggtgcaggtg
gagggcgtctccaacatttcagagagcgccactgggaaaatagacgagttcttcctcttt
ggttccttcctggaggccaccatgattgacaggaagatcggtgacaaagcgataagtttt
gaaatcacaataggtaactatggaaaccagatagatggtgtaagcaagtctttgacggca
aagaagaagaagaaagatggggagaatgaagaagaggagagcgatcttatacagaactcc
agtgaggacgaggcggacgaggacggggacctggtctctgtctcctccactcctccaatg
aagcccgtcatcactgacaggaattacttccatcttccctactttgaaaagaagccatgt
gtctacatcaaaagctggtggcaggaccagagaagacgactttacaactccaacatgatg
gacaagatcgctgacaagctggaagagggtttgaatgatgttcaggagatcattaagacg
gaaaaggcttttccagaacgcagactcaggggagtgctggaggagctcagcgtcggttgc
agtcggtttgtgactctggctaacaaggatgtgaaccaggccggccgaactaaattggat
cgagagcggctcaagtcctgcatgagagagatggacagcatgggccagcaggccaagcag
atccgaactcaggtgaagaaaaacacaatcagagacaaacttaagctggtgcagaacttc
ctgcagaggctccgtttccttgcagacgagcctcagcacagcatcccagatgtttttatc
tggatgatgagcaacaacaagcgcattgcctacgcccggattccttccaaagacattctc
tactccatagtggatgaggaaacaggaaaagactgcggcaaagtcaaagctgtcttcctc
aagctgcctggtaaaaagggatttggccctgcaggctggacagtacaggctaagctggag
ttgtatctgtggctcggcctcaacaaacaaaggaaggactttctaagcggtctgcctaac
ggttttgatgagatcaaatccactaaaacgggcccctgtcttcactctgtcccccctgtc
agcctcgtctacaacatgaagcaggtgtttcagctgagagcacacatgtaccaggcccgc
agtctgtttgctgcagacagcagtggcctttcggatccttttgctcgggtcttcttctcc
acacacagccaggttactgaggtcctgagtgagactctttgtccaacctgggaccagctg
ctggtgtttgatgatgtggagctgttcggtgaagccagcgagctgagagacgaccctcca
atcattgtcgttgaaatctttgaccaggacactgtgggcaaggcagaattcataggtcgg
gcatttgcgaagcccaccatcaagatgtgtgacgagcactacggccccccgaggttccca
ccccagctggagtactaccagatttacagagggaacagcactgccggggaactgctggct
gcctttgagctgctgcagataccttttgatgtggaggcgataaggcgagctctgatcgct
gtccataactttgctgttcctcaaataaaggttggtcaaggagggatagccgatcttcct
tcccttgaagggccgacagacacggagcgtggacccattttgcctgtgccattgggcatc
cgacccgtcctgagtcgctaccgtattgaggttttgttctggggtttaagggacctgaag
aggattaacctggctcaagtggatcggccccgtgtggacatagagtgtgcaggtagaggt
gtgcagtctgtcctcatccagaactacaagaaaaaccccaacttcagcatcctagttaaa
tggtttgaggtggaccttccagagaatgaactcctccacccccctcttaacatccgggtg
gtggactgccgggcatttggtcgttacatcttggttgggtcccatgctgtcaccagcctg
agacgtttcatttacagcaccccagacaagacctccaacaactgggccactgcagctaag
ctaatgaatggctacatggtccttgccaatggcggcttccagcctcgctcctcacccagc
ctttcctctcgcaccctctctcgccccgcaggtgacatcatcgtcaacatggacgcagag
ccttcggtccgaaagatggacacggttgtcaagttagatgctatgtctgatgctgttgta
aaagttgacatgactgaagaggagagtgacaaagagaaaaagaggaagaagaagaaaaag
aagggaggagtggaggaagaggacgagaccaatgagagagtgctggactggtggtccaaa
tattttgcttcaatagagacattgaaggagacgctcagagcccaggacgcggctcaggca
gaggcggaggagagagaggacctggagatagctgcagaggcagcagatataaaacctgat
gaccttcttctgaaaggctccaagacgaaggaaaagagcaaagagaagaagagctccaag
gacaagaagaaaggtcacgctgcagacggctctgagaaacgaacggttaaagcaagagtg
gacgagctaatggtgtacaacaaggagctggatagtgagtttggcaactttgaagactgg
ctccacactttcaacttgtatagaggaaaggctggggatgacgatgaacgcactctggat
gatgacaggattgttggcagattcaagggatccttatgtatgtacaagctacctctgtcg
gaggagatcacaagggagacaggatttgatcctagtatgggcatgttccagagcatcccg
cataatgatccaatcaacgtccttgtccgtgtctatgtagtcagggctacagatcttcat
cctgctgatatcaatgggaaggctgatccatacatcgttatcaagctgggcaagtcagag
atcaaggataaagagaactacatctccaaacagctcaatcctgtatttggcaaatcattt
gacattgaggccagattccccatggagtccatgctaacggtgtctgtgtatgactgggac
ctggtcggcactgacgacctgatcggagagacaaagattgacttggagaatcgtttctac
agcaaatacagagccacttgcggcatctcttccaactattctgtccatggatacaatgtt
tggcgggaccctatgaagcccagtcagatcttggccaagctctgtaaggacgccaagatt
gatggacctcattacgggccaggaggaaaagtcaaggtggccaatcggatttttcaagga
cctacagagattgaggatgaaaatggtctgaagaagcagactgaggagcatttggctctg
acggtgctgaaccactgggaggagatcccaagggtgggctggaagctcgtccctgaacat
gtggagacccgggccctgctaaaccccgacaaacccggcattgaacagggtcgtattgag
atgtgggtggatatgtttccaatggacatgcctgctcctggacctgcgatagacatatca
ccacgtaaaccaaagagatatgagctcagggtgattatttggaatacagacgaagtaata
ctggaggacgatgattacttcactggggaaaagtccagtgacatatttgtcaggggatgg
ctgaaaggacagcaggaggacaagcaggacaccgatgtgcactatcactccctgactggt
gagggaaactttaactggcgctttgtcttccccttcgattacctcatggctgaggagaag
atcgtcatctctaagaaagagtccatgttctcctgggatgagactgaatataaaatcccg
cctcgcctcacgctgcaggtctgggatgccgaccacttctctgctgatgacttcctgggt
gctattgagttggatctaaaccggttccctcgtggtgccaagacagccaagcagtgttcc
cttgacatgatccgaaatgagcaggagctgcccaccatttctatcttcaaacaaaagaga
gtcaagggctggtggccgtttgtagcacgcgatgagaacgatgagatggagctcacgggt
aaggtagaagctgagcttcatctggtgacagcagaggaggcggagaaaagtcctgtagga
ctgggacgaaatgagcctgatccactggaaaaaccaaatcgcccagacaccaccttcctt
tggttcctgagcccgctgaaagccattcgttacctggtgtgcaaccgctacaagtggctg
atcatcaagatagtgctggccgcgctgctgctcgtcatgctgggcctcttcctctacagc
atgccgggctaccttgtcaagaagctgctgggggcctaa
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integrated database retrieval system
