Etheostoma spectabile (orangethroat darter): 116706551
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Entry
116706551 CDS
T08457
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp02010
ABC transporters
esp04146
Peroxisome
esp04977
Vitamin digestion and absorption
esp04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116706551 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116706551 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
116706551 (abcd4)
04980 Cobalamin transport and metabolism
116706551 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116706551 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
esp02000
]
116706551 (abcd4)
Enzymes [BR:
esp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
116706551 (abcd4)
Membrane trafficking [BR:
esp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
116706551 (abcd4)
Transporters [BR:
esp02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
116706551 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
AAA_7
FtsK_SpoIIIE
AAA_5
DUF87
NACHT
nSTAND1
T2SSE
Motif
Other DBs
NCBI-GeneID:
116706551
NCBI-ProteinID:
XP_032399351
LinkDB
All DBs
Position
18:12947701..12958616
Genome browser
AA seq
615 aa
AA seq
DB search
MPRLEKSNGRGTKRLKLDWKFVQRFCSIQKVLFPSWTSQSALMFGTLLVVTLTEQLIIYQ
VGVLPSHFYSVLAEKDYPGFRSLVGTAMVLILLNSTLKSIDQYICNQMYVSWRRTLTESL
HTSYFQGRVYYTLNVLKEDIDNPDQRISQDAERLCKQMSTMASRLIVSPFTLAYYTYHCF
HSTGWIGPVSIFGYFVVGTIANKILMGPIVSTLFEQEKLEGDFRFKHMQIRVNAESAAFY
RAGKVEHMRTDRRLQALLQTQKSLMNKELWLYIGVNTFDYVGGFLSYIIIAIPIFTGIYD
GLTPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTHRIGELREVMDDILRKQC
DYDPASGESYDFDSDFNVHAGPVDTAFILDHLSYKSPYSDELLVEDLSLKISQGTHLLVV
GNTGTGKTSLLRVLNRLWEAHSGFVQMTTCFGPRGTLFLPQKPYLTDGTLREQVIYPLKD
IYPASGSVDDDRIIQFLELAGVSSLLKRTGGLDEKVDWNWYDVLSPGEMQRLCFARLFYL
QPKYAVLDEATSALTEEAEAQLYRTCKQLGMTLVTLGHRSSLEKYHDVQLKLCGGGLWEL
TKLKGGSGRLREEAT
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtttggaaaagtcaaatggcagagggacaaaaagactaaagctagactggaag
tttgttcagaggttctgcagcatccagaaggtcctgttcccatcatggaccagtcaaagt
gctctgatgtttgggacgctgcttgttgtcactctgacagagcagctgatcatttaccaa
gtgggtgtcctccctagccacttctacagtgtgctggcagagaaagattacccaggcttc
aggagtctggtggggacagctatggtgctcatcttgctcaactccacattgaaaagtatc
gaccagtacatttgcaatcagatgtatgtaagctggaggaggacgctaactgagagcctt
catacgtcctacttccagggccgagtctattacactctcaacgtactcaaagaggatata
gacaacccagaccagcgaatcagtcaggacgcagagaggttgtgtaagcagatgagcacc
atggctagtcgtttgattgtgtcaccgttcacactggcttactacacttaccactgcttt
catagcactggttggatcggccctgtaagtatctttggctactttgttgtgggaaccatt
gccaataaaatcctcatggggccgattgtgtcaactctgtttgagcaagaaaaactggag
ggagacttcagattcaagcacatgcagatccgtgtcaatgcagagtctgcagctttttac
agagccggtaaagtggagcatatgaggaccgaccgcagactgcaggctctgttacaaact
cagaagagtctaatgaacaaagagctctggctttacatcggggtaaacacctttgactac
gttggaggtttccttagctacattataattgccattcccatctttactggtatctatgat
ggtctcacacctggtgagctcagtgcactcatcagtaagaacgcctttgtgtgcatctac
ttgataaatggcttcacgcagctaatagacctgtcaaccactctgtcggatgtggctgga
tacacccacaggataggcgagctgagggaggtgatggatgacatcctccgtaagcagtgt
gactatgacccggcatcaggggaaagctatgactttgacagtgacttcaacgtccacgca
ggccctgtggacactgccttcatcctggaccatctttcatacaaatctccttactcagat
gagctgctggtggaggatttgagtctgaaaatcagccagggaacacatctactggtggtg
gggaacacaggcaccggcaagacgtccctactgagggtcctcaaccgactctgggaggca
cacagtggttttgtccagatgaccacatgtttcgggcccagaggaaccctctttctgcca
cagaaaccttacctgactgatggcacactgcgtgaacaggtgatctacccactgaaggat
atttaccctgcatcagggtcagtggacgatgacagaattatacaattcctggaactagca
ggagtgtccagtctcctaaagcggacaggtgggctggatgaaaaggtggactggaactgg
tatgatgttctgtctccaggtgaaatgcagcgtctctgctttgcacgactcttctacctg
cagcccaaatatgcagtgctggatgaggccaccagtgctctgacggaggaagcagaagca
cagctgtacagaacctgtaaacagctcggcatgactttggtcactctgggacaccgcagc
agcctggagaagtaccatgacgtccagttgaaactgtgtggaggaggcctgtgggagttg
acaaagttaaaaggaggaagtgggagactaagagaagaagccacatga
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