Empedobacter stercoris: HNV03_09315
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Entry
HNV03_09315 CDS
T06804
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
este
Empedobacter stercoris
Pathway
este00300
Lysine biosynthesis
este00550
Peptidoglycan biosynthesis
este01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
este00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HNV03_09315
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HNV03_09315
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
este01011
]
HNV03_09315
Enzymes [BR:
este01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HNV03_09315
Peptidoglycan biosynthesis and degradation proteins [BR:
este01011
]
Precursor biosynthesis
Amino acid ligase
HNV03_09315
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QNT14844
LinkDB
All DBs
Position
complement(1925175..1926638)
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AA seq
487 aa
AA seq
DB search
MRNLVDLLFKVSISETIGSTKVEVNTIQFDSRKVSKDDVFVAVNGVSVDGHHYISKAIDL
GAKAIVCEILPENLVDEVTYVKVENSTIALGVLASNFYENPTKDLKLVGVTGTNGKTTTT
TLLYELFTKLGYACALISTIKIVIDGEVIPSTHTTPDILTLNKMFREAVDRGCEFAFMEV
SSHGIHQNRIAGLHFEVAGFTNITHDHLDYHKTFANYLAAKKKFFDDLPKTSTAISNADD
KNGKVMLQNTVATKRLYALKTDADFKGRIIEHQFDGMQLEFNGKEFWTSLIGQFNAYNLV
LVFGIASILGQDELEVLKALSTLGNVDGRFQTFQTKSGIIVIVDYAHTPDALENVLDTIE
GIRTKNEKLITVVGCGGDRDKTKRPEMADIASEKSNLAIFTSDNPRTEDPEEILREMEVG
VKPQFYNRTLKITDRKEAIKTALKMAEPKDIILIAGKGHETYQEINGIRTHFSDVEIASE
LSKILNK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatttagttgatctattatttaaagtttccatctcagaaacgattggttcaaca
aaagttgaagtcaatactattcaatttgattcaagaaaagtatcaaaagatgatgttttt
gttgctgtaaatggagtttcagtagacggacatcactatataagtaaagcaatagattta
ggtgctaaggcaattgtttgtgaaattttaccagaaaatttagtggatgaagtaacctat
gtgaaagttgaaaattcgacaatcgcattaggtgttttagcttctaatttttatgaaaat
ccaacaaaggatttaaaacttgttggagttacaggaacaaatgggaaaacaacaacaacg
acattgttgtatgagttgtttacaaaattaggttatgcttgtgcgttaatttcgacaatt
aaaattgtgattgatggagaagtgattccttctacacatactacgccagatattttgaca
ttaaacaagatgtttcgcgaagcagtagatagaggttgcgaatttgcttttatggaagtt
tcttcgcacggaattcatcaaaatagaattgcaggtttacatttcgaagttgctggattt
acgaatatcacacatgatcatttggattaccataaaacatttgcaaattatcttgcagct
aaaaagaaatttttcgacgatttaccaaaaacgtcaacagcaatttcaaatgcagatgat
aaaaatggaaaagtgatgcttcagaatacagtggcaacaaaaagattgtacgcactaaaa
actgatgcagatttcaaaggaagaattatcgaacatcaatttgatggaatgcaattagaa
ttcaatggaaaagaattctggacatcattaattggtcaatttaatgcctataatttggta
ttagtttttggtatagcctcaattttagggcaagatgaattagaagtcttaaaagcattg
agcacacttggaaatgtagatggtcgttttcaaacatttcagacgaaatcaggtattatt
gtgattgtagattatgcacatacgccagatgctttagaaaatgttttggatacaattgaa
gggattcgtaccaaaaatgaaaaattaataacagttgtaggttgtggtggagatcgcgat
aaaacaaaacgtcctgaaatggctgatatcgcaagcgaaaaatctaatcttgccattttt
acatcagataatccaagaacagaagatccagaagagattctacgtgaaatggaagttggt
gtgaaaccgcaattttataatcgcaccctgaaaattacagatcgtaaagaagctataaaa
acagcacttaaaatggctgagccaaaagatattattttgattgcaggaaaaggtcacgag
acatatcaagaaattaacggaataagaacacatttttctgatgttgaaatagcgtcagaa
ttgagtaaaatattgaacaaataa
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