Echinops telfairi (small Madagascar hedgehog): 101642944
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Entry
101642944 CDS
T08707
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04360
Axon guidance
etf05017
Spinocerebellar ataxia
etf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101642944 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101642944 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
101642944 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etf04040
]
101642944 (TRPC3)
Ion channels [BR:
etf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101642944 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_5
PBC
Motif
Other DBs
NCBI-GeneID:
101642944
NCBI-ProteinID:
XP_004716546
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAAEYGNIPVVRKMLEESRTLNVNCVDY
MGQNALQLAVGNEHLEVTELLLKKENLARIGDALLLAISKGYVRIVEAILNHPGFAASKR
LTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILAAHCQKYEVVHMLLLKGARIERPHDY
FCKCGECTEKQRHDSFSHSRSRINAYKGLASPAYLSLSSEDPVLTALELSNELAKLANIE
KEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGDLESAEPLEMHRHKSSLSRVKLA
IKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTVAIKCLVVLVVALGLPFLAIGYWIAPC
SRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDRFEGITTLPNITVIDYPKQIFRVKTT
QFTWTEMLIMVWVLGMMWSECKELWLEGPREYVLQLWNVLDFGMLSIFIAAFTARFLAFL
QATKAQRYVDNNIQESDLSEVALPPEIRYFTYARDKWLPSDPQIISEGLYAIAVVLSFSR
IAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYSYYLGAKVNAAFT
TVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLYGIYNVTMVVVLLNMLIAMINS
SYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLVPSPKSFVYFFMRIINFSKCRRR
RFQKDIEMGMGNSKSRLNLFTQSNSRVFESHSFNSILNQPTRYQQIMKRLIKRYVLKAQV
DKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELAILIHKLTEKLNPSMLRGE
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagaagggccggcgccaggccgtccggggcccggcgttcatgttcaacgaccgg
ggcaccagcctcacggcggaggaagagcgcttcctcgacgccgccgagtacggcaacatc
cccgtggtgcgcaagatgctggaggagtcccggacgctgaacgtcaactgcgtggactac
atgggccagaacgcgctgcagctggccgtgggcaacgagcacctggaggtcaccgagctg
ctgctcaagaaggagaacctggcgcgcatcggcgacgcgctgctgctggccatcagcaag
ggctacgtgcgcatcgtggaggccatcctcaaccacccgggcttcgcggccagcaagcgc
ctgacgctgagcccgtgtgagcaggagctgcaggacgacgacttctacgcctacgacgag
gacggcacgcgcttctcgcccgacatcacccccatcatcctggcggcgcactgccagaag
tacgaggtggtgcacatgctgctgctgaagggcgcccgcatcgagcggccgcacgactac
ttctgcaagtgcggcgagtgcaccgagaagcagcggcacgactccttcagccactcccgc
tccaggatcaacgcctacaaggggctggccagcccggcgtacctgtccttgtccagcgag
gaccctgtgctcacggccctggagctcagcaatgagctggccaagctggccaacatcgag
aaggagttcaagaatgactatcgaaagctgtccatgcaatgcaaagactttgtggtgggc
gtgctggacctctgccgagactctgaagaggtggaggccattctgaatggagatctggaa
tcggcagagcctctggagatgcacaggcataaatcttccttgagtcgtgtcaaacttgcc
attaagtatgaagtcaaaaagtttgtggctcaccccaactgccagcagcagctgttgacc
atctggtatgagaacctgtctggcctgcgggaacagaccgtagccatcaagtgcctggtg
gtgctggttgtggccttgggtcttccttttctggccatcggctactggatcgcaccttgc
agcaggctggggaaaattctgagaagccctttcatgaaatttgtggcgcatgctgcttcc
ttcatcatcttcctgggtctccttgtgttcaatgcctccgacaggttcgaaggtatcacc
acactgccaaatatcactgtcattgactatcctaagcagatcttcagggtgaagaccaca
cagttcacgtggactgagatgctaattatggtttgggttcttggaatgatgtggtccgag
tgtaaggagctctggctggaagggccgcgggaatacgtgctgcagttgtggaacgtgctg
gacttcgggatgctctccatcttcatcgctgcgttcacagcccgcttcctagctttcctt
caggcgacgaaagcgcagcgatacgtggacaataatatccaagagagcgacctcagtgaa
gtggcgcttcctcccgagatacgctatttcacttatgccagagataaatggctgccttct
gaccctcagatcatatccgaaggtctctatgccatagccgtggtcctcagcttctctcgg
attgcctacatcctccctgcgaatgagagcttcggccccttacagatctctctgggaagg
actgtgaaggacatattcaagttcatggtcctctttattatggtctttcttgccttcatg
attggcatgtttatactttattcttactacttgggggctaaagtgaatgctgcttttacc
accgtagaagaaagcttcaagactttgttctggtcaatatttgggttatctgaagtgact
tccgttgtactcaaatatgatcacaaattcatagagaatattggctatgttctttatgga
atatacaatgtaacgatggtggtcgttttactcaatatgctaattgctatgataaatagc
tcatatcaggaaatcgaggacgacagtgatgtagaatggaagtttgcacgttcaaaactt
tggttatcctattttgatgatggaaaaacattacctccacctttcagtctagttcctagc
cccaaatcctttgtttatttctttatgcggatcatcaacttttccaaatgcagaaggaga
aggttccagaaggatatagaaatgggaatgggtaactcaaaatccaggttaaacctcttc
actcaatctaactcaagagtttttgaatcacacagttttaacagcattctcaaccagcca
acacgctatcagcaaataatgaaaagactaataaagcgctatgttctgaaagcacaagta
gacaaagaaaatgatgaagtgaatgaaggtgaattaaaagaaatcaagcaagacatttcc
agtcttcgttacgaacttttggaagacaagagccaagcaacagaggagctagccattcta
attcataaactcactgagaagctgaaccccagcatgctgagaggtgaatga
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