Echinops telfairi (small Madagascar hedgehog): 101651279
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Entry
101651279 CDS
T08707
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etf03041
]
101651279 (DHX9)
03012 Translation factors [BR:
etf03012
]
101651279 (DHX9)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101651279 (DHX9)
5.6.2.6 RNA 3'-5' helicase
101651279 (DHX9)
Spliceosome [BR:
etf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101651279 (DHX9)
Translation factors [BR:
etf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101651279 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
nSTAND3
Dicer_dimer
DEAD
AAA_14
ATPase
Motif
Other DBs
NCBI-GeneID:
101651279
NCBI-ProteinID:
XP_045153922
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MGDIKNFLYAWCGKRKIAPAYEIRAVGNKNRQKFMCEVRVEGFNYTGMGNSTNKKDAQSN
AARDFVNYLVRVNEVKAEEVPAVGVAPPIPSVTDNPDGTASTDGSAPTTLGGPLPPHLAL
KAVLASTRNHSEQILHCEIWYTKTTLESEEVDLNAGLHGNWTLENAKARLNQYFQKEKIQ
GEYKYTQVGPDHNRSFIAEMTIYIKPLGRRIFAREHGSNKKLAAQSCALSLVRQLYHLEV
IEAYSGLTKKKEGETVEPYKVNISQDLEHQLQNVVQELNLEIAPPPEDPSVPAVLNMGKL
STFEPAQQQNQVGVVPWSPPQSNWNPWTSSNIDEGPLAYATPEQISTDLKNELMYQLEQD
RNLQGILQERELLPVKKFESEILDAVSQNSVVIIRGATGCGKTTQVPQFILDDFIHNDRA
AECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGQWC
VLFRATIWDLCCVHVEDLVLLKRASLIILVCRELLTVNFVGGMYNPIIEVYGRTFPVQEY
FLEDCIQMTHFIPPPKDKKKKDKDDDGGEEEDTNCNLICGDEYGPETRMSMAQMNEKETP
FELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNAHFGSHRYQILPLHSQIPRE
EQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWA
SKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMTPEMFRTPLHEIALSIKLLRLGGI
GQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCI
FYVGDAVCTISAATCFPEPFISEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGE
EAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEECLLTQVFTNTGPDNNLDVVIS
LLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSVNCPFGSQDMKYPCPFFVFGEKIRTRA
ISAKGMTLVTPLQLLLFASKKVQSDGQIVLIDDWIKLQISHEAAACITALRAAMESLVVE
VTKQPDIISQLDPVNERMLNTIRQISRPSAAGITLMIGSVRYGDGPRPPKMARYDNGSGY
RRGGSSYGGGGYGGGYGSGGYGGGGGYGGGGGYGGGGGYGGGGGYGGGSNSYRGGYGGGG
GFRGGGFRGGSGGEYRGSGGGGYRGSGGFQRGGPRGGYGGGYFGQGRGGGGF
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacattaaaaattttctatatgcctggtgtggcaaaaggaagatagcgccagcc
tatgaaattagagccgtgggaaacaaaaacaggcagaagttcatgtgtgaggttcgggta
gaaggatttaattacactggcatgggcaattccaccaataaaaaagatgcacagagcaat
gctgccagagactttgttaactatttggttcgagtaaatgaagtaaaggctgaagaagtc
ccagctgttggagtggcacctcctataccttcagtcactgataatcctgatggtacagca
agtactgatggaagtgcacccacaaccctaggaggaccacttcctccacatctggccctc
aaggcagttctggccagcactagaaatcattcagaacagattttgcactgtgaaatatgg
tatacaaagacaactctagaatcagaagaagtggatttaaatgctgggcttcatggaaac
tggaccttggaaaatgctaaggctcgcctgaaccagtatttccaaaaagaaaagatccaa
ggagaatataagtacacccaagtgggtcctgatcacaacaggagctttattgcagaaatg
accatttatatcaagccactgggcagaaggatttttgcacgtgaacatggatcaaataag
aaattggcagcccagtcttgtgccctgtcacttgtgaggcagctctaccatcttgaagtg
attgaagcttactctggacttacaaagaagaaagagggagagacagtggaaccctacaaa
gttaatatctctcaggatttggagcatcagctgcaaaatgtcgttcaagagctcaatctt
gagattgcaccaccacccgaggatccttctgttccagctgtgcttaacatgggtaaattg
tccacatttgagccggctcagcaacaaaatcaagtgggtgtggttccttggtcacctcca
caatccaactggaatccttggactagcagcaacattgatgagggccctttggcttatgct
actccagaacagataagcacagacctcaagaatgaattaatgtaccagctggaacaggat
cgtaatctgcaaggaatcttgcaggaaagagaattactccctgtgaagaaatttgaaagc
gaaatcctggatgctgttagtcagaattcagttgtgattatacgaggagctactggttgt
ggtaagaccacccaggttcctcagttcattctggatgactttatccacaatgaccgagca
gccgagtgcaacattgtagtaactcagcccaggagaatcagtgctgtgtctgtggcagaa
cgggttgcatatgagagaggagaagagcctggaaaaagctgtggctacagtgttcgattt
gagtctatacttccccgccctcatgccagtataatgttttgtactgtaggtcagtggtgt
gttttgtttcgggctaccatttgggatttgtgttgtgttcatgtggaggatttggttttg
ctcaaaagggccagtttgataattcttgtttgtagagagcttttgacagttaattttgtt
ggtggaatgtataatcccatcattgaggtttatggacgaaccttcccagtacaagaatat
tttctggaagactgtattcagatgacccactttattcctccaccaaaggacaagaagaaa
aaggataaggatgatgacggtggtgaggaggaggacacaaactgcaatctgatctgtggt
gatgaatatggtccagaaacaaggatgagcatggctcaaatgaatgaaaaggaaactccc
tttgaactgatcgaggcactacttaaatatattgagaccctcaatgttcctggagctgtg
ttggttttcctgcctggctggaatttgatttatacaatgcaaaaacatttggaaatgaat
gctcattttgggagccatcggtatcagattctgcctctgcattctcagattcctcgggaa
gagcagcgtaaagtgtttgaccctgtcccagttggagtgactaaggttattttgtccaca
aatattgctgagacaagcattaccataaatgatgttgtctatgtcattgattcctgcaag
cagaaagtgaaactgtttactgctcacaacaacatgaccaactatgctacagtgtgggct
tccaagacaaaccttgagcagcggaaagggcgagcaggtcgtgtaaggcctggattctgc
tttcacctctgcagccgagctcgatttgagaaacttgaaacccacatgaccccagaaatg
ttccgaacacctttacatgagattgctttgagcatcaaacttcttcgtctgggaggaatt
ggtcagttcctggccaaggcgattgaacctccacctttggatgctgtgattgaagcagag
cacactctcagagaacttgatgcgttagatgctaatgatgaattgactcctttgggccga
attctggctaagctccccattgagcctcgttttggcaaaatgatgataatgggatgtatt
ttctatgtgggagatgctgtctgtaccatctctgctgccacctgctttcctgagcctttc
atcagtgagggaaagagactgggctatatccatcggaattttgctggcaaccgattttct
gatcatgtggcccttttatcagtattccaagcatgggatgatgctagaatgggtggagaa
gaggcagagatacgtttttgtgagcacaaaaggctcaacatggctactcttagaatgact
tgggaagcaaaagttcagctcaaagagattctgattaattctggatttccagaagaatgc
ttattgacacaagtgtttaccaacactggaccagacaataatttggatgtggttatctct
ctcctggcctttggtgtatatcccaatgtgtgctatcataaggaaaagaggaagattctc
accactgaagggcgtaacgccctaatccacaagtcatctgtgaactgtccctttggcagc
caggacatgaagtacccatgtcccttctttgtatttggtgaaaagattcgaactcgagcc
atttctgctaaaggaatgacgttagtgacccccttgcagctgctgctctttgcttccaag
aaagttcaatctgatggacagattgtgcttattgatgactggatcaaattgcaaatatcc
catgaagctgctgcctgcattactgctctccgggcagcaatggaatctctggttgttgaa
gtcactaagcagcctgatattatcagccagttggaccctgtaaatgagcgaatgctgaac
acaatccgtcagatctctaggccctcggctgctggcattacccttatgattggcagtgta
cggtatggagatggtccacgccctcccaaaatggctcgctatgacaatggaagtggatat
agaagagggggttccagttatggtggcggtggctatgggggtggttatggcagtggagga
tatggtggcggtggaggctacggcggcggtggaggctatggtggtggtggaggctatggc
ggcggtggaggctatggtgggggctccaactcctatcggggaggctatggtggtggtggt
ggctttagaggaggtggctttagaggaggctctggaggtgaatacagaggatcaggggga
ggagggtaccgaggctctggaggatttcagcgaggaggtcccagggggggttatggaggt
ggctactttggccaaggaagaggaggtggtggcttttaa
DBGET
integrated database retrieval system
