Echinops telfairi (small Madagascar hedgehog): 101652183
Help
Entry
101652183 CDS
T08707
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03018
RNA degradation
etf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101652183 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
101652183 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101652183 (LSM3)
03041 Spliceosome [BR:
etf03041
]
101652183 (LSM3)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101652183 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
101652183 (LSM3)
Spliceosome [BR:
etf03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101652183 (LSM3)
Complex C
U2 snRNP components
101652183 (LSM3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
101652183
NCBI-ProteinID:
XP_004702428
UniProt:
A0ABM0IKZ6
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatgtggaccagcaacaaactaccaacacagtagaggagcctctggatctc
attaggctcagcttggatgaacgcatttatgtgaaaatgcgaaatgaccgagagcttcga
ggaagattgcatgcttatgatcagcatttaaatatgatactgggagatgtggaagaaact
gtgactactatagaaattgatgaagagacatatgaagagatatataaatcaacaaaacgg
aatattccaatgctctttgtgcggggtgacggtgttgtgctagtggcccctccgctgaga
gttggctga
DBGET
integrated database retrieval system
