Echinops telfairi (small Madagascar hedgehog): 101659540
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Entry
101659540 CDS
T08707
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04360
Axon guidance
etf04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101659540 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
101659540 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etf01009
]
101659540 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etf04040
]
101659540 (TRPC5)
Protein phosphatases and associated proteins [BR:
etf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101659540 (TRPC5)
Ion channels [BR:
etf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101659540 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
101659540
NCBI-ProteinID:
XP_004710114
UniProt:
A0ABM0IXJ2
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWETWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHPRRSFSTSSTELSP
RDDTNDGSGGARAKSKSVSFSLGCKKKACHGPPLIRTIPRASGGQGKAKAESSGKRSFMG
PSLKKLGLLFSKFHGPMSEPSAEPMYTISDGIAQQHYMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEARGATASRECPLACSSSLHCASTICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDEQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgtactacaaaaaggtcaactactcaccctaccgggaccgcatccccctg
cagatcgtgagggcggagacagagctctctgcagaggagaaggccttcctcaatgcagtg
gagaagggggactacgccacagtgaagcaggccctacaggaggcggaaatctactacaat
gtcaacatcaactgcatggaccctctgggtcgaagcgccctcctcatcgccattgagaat
gagaacttggagatcatggagctactgctgaaccacagcgtgtacgtgggtgatgcactg
ctctatgccatccgcaaggaagtggtcggcgctgtggagttgcttcttagctacaggcgg
ccaagtggagagaagcaggtccccactctgatgatggacacccaattctcagagttcacc
ccggatattactcctataatgctggctgcccacaccaacaactatgaaatcatcaaattg
cttgtccaaaaacgagtcactatcccacggccacaccagattcgctgcaactgtgtggag
tgcgtgtccagttctgaggtggacagcctgcgccactcccgctcccggctcaacatctat
aaggctctggcaagtccttcgctcattgccttgtcgagcgaggatcccattctaactgcc
ttccgtctgggctgggaactcaaggagctgagcaaggtggagaatgagttcaaagctgaa
tatgaagagctgtcccagcaatgcaagctctttgccaaagacctgctggaccaagctcgg
agctcccgggaactggaaatcatcctcaaccatcgagatgaccacagtgaggagcttgac
cctcagaagtaccatgacctggccaaactgaaggtagcaatcaaataccaccagaaagag
tttgttgctcagcctaactgccaacagttacttgccaccctgtggtatgacggcttccca
ggatggcggcggaaacactgggtagtcaaacttctgacctgcatgaccattgggttcctg
tttcccatgctgtccatagcctatctgatctcacccaggagcaacctcggactgttcatc
aagaaacccttcatcaagtttatctgccacacagcatcctatctcaccttccttttcatg
ctgcttctggcttctcagcatatcgtcagaacagacctgcatgtgcaagggccaccacca
actgtcgtggaatggatgatattgccttgggttctaggtttcatctggggggaaattaaa
gagatgtgggatggtggatttactgaatacatccatgactggtggaacctgatggatttt
gcaatgaactccctctacctggcaactatctccttgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaggaatgggaaacgtggcacccaaccttgattgcagaagca
ctctttgcaatatccaacattttaagttccctgcgtctcatatccctgttcacagccaac
tcccacttagggcctctgcaaatctctttggggcgcatgctgctggatatcctcaaattc
ctctttatctactgcctggtactgctagcttttgccaatggattgaaccagctttacttt
tattatgagaccagagctatcgatgagcctaacaactgcaaggggatccggtgtgagaaa
cagaacaacgccttctccacgcttttcgaaactctgcaatcactgttctggtctgtattc
ggccttttgaatctctatgttaccaacgtgaaagccaggcacgagttcacagagtttgtg
ggagctactatgtttggaacctacaacgtcatctccttggtagtgctactgaacatgctg
atcgccatgatgaacaactcctaccaactgattgctgatcatgccgatattgaatggaag
tttgcaaggaccaagctctggatgagttattttgatgaaggtggcaccttaccacctccc
tttaacatcattcccagccccaagtcatttctctacctgggtaactggttcaacaacacc
ttctgccccaaaagagaccctgatgggagacggcgaaggcacaacttaagaagtttcaca
gagcgtcatgctgacagcctgatacagaaccaacattaccaggaagttatccggaattta
gtcaagagatacgtggctgctatgataagaaattcaaaaaccaatgagggattaacagaa
gaaaattttaaggaattaaagcaggacatttccagctttcgatatgaagtgcttgacctc
ttaggaaataggaaacacccaaggagaagcttttcaactagcagcactgaactttctccg
cgggatgataccaacgatggcagtggcggagcgcgggccaaatccaagagtgtctctttc
agcttgggctgcaagaaaaaggcgtgccatggtccgcctctcatcagaaccatcccacga
gccagcggcggccaaggaaaagcaaaagctgagtcatcaggcaaacgctctttcatgggt
ccttcgctcaagaaactgggtctcttgttctccaagtttcacggtcccatgtctgaaccc
agtgcagagccaatgtacacaatttcggatggcattgcgcagcagcactacatgtggcag
gacatcagatattctcagatggagaaagggaaagccgaggcttgttctcaaagtgaaatt
aacctcagtgaggtagaattgggggaagcccggggcgccactgcaagccgggaatgcccg
ctagcctgttccagctctcttcactgcgcctctaccatctgctcctcaaattccaaactt
ttagactcctccgaggatgtgtttgaaacttggggggaggcctgtgacttgctgatgcac
aaatggggtgacgaacaggaagaacaagtgacaactcggctctag
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