Candidatus Endomicrobiellum trichonymphae Rs-D17: RSTT_629
Help
Entry
RSTT_629 CDS
T05087
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
eti
Candidatus Endomicrobiellum trichonymphae Rs-D17
Pathway
eti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RSTT_629 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eti03400
]
RSTT_629 (nth)
Enzymes [BR:
eti01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RSTT_629 (nth)
DNA repair and recombination proteins [BR:
eti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RSTT_629 (nth)
Prokaryotic type
RSTT_629 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
BAV59209
LinkDB
All DBs
Position
complement(978254..978892)
Genome browser
AA seq
212 aa
AA seq
DB search
MEKNKKEHVVRIIKILEKDYGHVECALNFSSPFELLAATILSAQCTDERVNKVTKDLFKR
YKSVEDYANADILELENYIKSAGFFRNKAKNIIKSAQMVINKYNGDVPQTMKELLELSGV
ARKTANVVLGSAFGKSEGIAVDTHVIRITNLLKLTEYDDPVKIEKDLMKTIPKKYWMNFS
FLIQTLGRIICKARNPGHIVCPLNEICPSSQK
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaataaaaaagaacatgtggtaagaataataaaaattttagaaaaagattac
gggcatgtagaatgcgctcttaatttttctagtccttttgaacttcttgcggcgactatt
ttgtctgcacagtgtacggatgaaagagttaataaggtaacaaaagatctttttaaaaga
tataaaagcgtagaagattatgcgaatgccgatattttagaacttgagaattatataaaa
tctgcgggatttttcaggaataaagcaaaaaatattattaaatccgcccagatggttata
aataaatataacggagacgtgccgcagactatgaaagaactgcttgaacttagcggtgtt
gcaagaaaaactgcaaacgttgttttaggaagtgctttcggaaaatctgagggtattgct
gttgatacgcatgttataagaattacaaatttgctgaaacttacagagtatgacgatccg
gttaaaattgaaaaagatttaatgaaaacaattcctaaaaaatactggatgaacttttct
tttctgatacagaccttgggaagaataatttgcaaagctagaaaccctggtcatatagtt
tgtccgctgaatgaaatttgtccgtcatcacagaaataa
DBGET
integrated database retrieval system
