Empidonax traillii (willow flycatcher): 114058744
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Entry
114058744 CDS
T05887
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114058744 (RNF123)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114058744 (RNF123)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114058744 (RNF123)
Multi subunit type E3
KPC complex
114058744 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
114058744
NCBI-ProteinID:
XP_027742193
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MTSRGAGTAFSRKNYRLSTEPEKSKVTGIVNSRLLNDYLHRVFTNADGNQPAAAYRKHLT
FQNLQEHLERLLAEENGSEDSRDQVAEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGMSLGTAFDNITRGAGMAYFPAISL
SFKESVAFNFGSRPLRYPVEGYRPLQDPPVADLVKARKLLGYLKNVIHVGIDVTEGKLVE
KDTSMWQLQGEPTVLITLAHIFNYFSPLMCKVYLVEDVLMTFLLSILERGGAVEAHPLIQ
QLLDLMWLLMEEYEVHECLKQLLMSLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSRK
YLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEESAEE
RLRRRAYERGCQRLKKRIEVVEGLQVQILKLLLNNKDRGGGEASRYIFLNKFRKFLQENA
SNRGNLTVLCPPEYMVCFLHRLIAALRFFWDGHKAKTPAALSSEEAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLAAKANVLIDPAELQAVTMDDLDEDEESATSAAQSQRPSA
ALAIGGALARPGWLSSPTLGRANRFLSTAAVSLMNPRRPLGTLEKIKVRTLSVEQRTEED
IEGTHGNEGLLLGRPPEEPDQPITENSLLEVLDGIVMMYNLSVHQQLGKMVGVSDDVNEY
AMALKDTEEKISRCPKRRRDIHEELLKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDIY
WLLRVCIRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEELPGYDETLMR
LAAILAKHFADSRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRISMMKNLLAPYE
QRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDASLPSLQKPCPSTLLQRHMADLL
RSDRDLAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSV
SLLRVLEMTVTLAPEIFLDWNRPSSELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPG
LESVDHYPILVAVTGILVRLLVDTDVQGAERATAVLLADPCFQLRSIQYLLGHAEPSALA
AAAPATDKRHFSLHTYTEYISAEELAKVEKMLSHLSEESKQAAATTLPTSEEDLCPICYA
HPISAIFRPCSHKSCKACINQHLMNNKDCFFCKATITGVDDFTKPASS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaagaggtgctgggactgctttctcaaggaagaattacaggctgagcactgag
ccagagaagtccaaggtcacagggatcgtgaacagcaggctgctgaatgattatctgcat
cgagtctttaccaatgctgatgggaaccagcctgcagctgcttacagaaagcacctgacg
ttccagaacctgcaggagcaccttgagcggttgctggcagaggagaatggctctgaagac
agtcgagatcaggtagcagagggccgactcggcccctccactgtggtgttggaccacacc
agtgggtttgaggggctcctgctggttgatgatgacttacttggggtgattggccacagt
aactttgggtccatcagggccacaacgtgcgtgtataaagggaaatggatttacgaagtg
ctcatctcctcccagggactcatgcagattggctggtgtactctcaactgcagatttaat
caggaggaaggagttggagatactccagattcatatgcctatgatggaaacagggtgcgc
aagtggaacgtgactactaccaactatggcaaatcctgggcagcaggagacatcgtcagc
tgtctgatagacctcgatgagggcaccattgctttctgcttgaacggcatgtccctggga
accgcctttgataacatcacgaggggtgctggaatggcttatttccctgccatcagcctc
tccttcaaagagtctgttgcttttaacttcggaagccgcccgctccgttatccagtggaa
ggttaccggcccttgcaggatcctcccgtggcagacctggtgaaggctcggaagctgttg
ggctacttgaagaacgtgatccatgttgggatagatgtgacggaaggaaagctggtggag
aaggacacatccatgtggcagctgcagggagaacccacagtgttgattacattagctcac
atcttcaattatttctcccctctcatgtgcaaggtgtacctggtggaagatgtgctcatg
accttcctgctgagcatccttgagcgaggaggggcggtggaggcccatccccttattcag
cagctactggatctcatgtggcttcttatggaggagtatgaagtgcatgagtgcctcaag
cagctactgatgtccctgctgcgggcttacaggttctcccccatcatcccagacctggga
ttacaaattcactacctccggctcaccattgcagtcttgaagcatgagaaatccaggaaa
tacctactcagcaatgttcttttcgatgtgctccgttcagttgtgttcttctacatcaag
agcccgctgcgtgtggaggaggcaggtttgcaggagctcattcccaccacgtggtggcca
aaccgcttcaccaaggagggcaaggagagtaaggaggtgaaggaggagagtgctgaggag
agactgaggcgtcgggcatatgagagaggttgccagcggctcaagaaacgcattgaagtg
gtggaaggtctccaggttcagattctgaagctgctgctgaacaacaaggacagaggaggg
ggggaagcctccagatacatcttcctaaacaaattccgcaagtttcttcaggaaaatgct
agcaacagagggaacctgactgtgttgtgcccaccagagtacatggtgtgcttcctgcac
cgcctcatcgctgccctgcgcttcttctgggatggacacaaggcaaagaccccagctgcc
ctgagcagtgaagaggcgtatgtccctcctcaactcttctataatgggaaggtggattac
tttgaccttcagcgacttggaggactcctgtctcaccttaagaagactctgaaagatgac
ctggctgcaaaagccaatgtcctgatcgaccctgcagagctgcaggcagtgactatggat
gatcttgatgaagatgaggaatcagcaacatcagcagcacagtcccagcgtccctctgcc
gccctggccatcggtggagctcttgccaggcctggctggctcagctcccccacgctgggc
cgtgccaaccggttcctgagcacggcagccgtcagcctgatgaacccgcggcggccgctg
ggcaccctggagaagatcaaggtgcgcacgctgagcgtggagcagcgcacagaggaggac
attgaaggcacccatggaaatgagggtctcttactgggcagacccccagaggagccagac
cagcccatcactgagaattcccttctggaagtcctggatgggatagtgatgatgtacaac
ctcagtgtccaccagcagctcgggaagatggttggggtgtcagatgatgtgaatgaatat
gccatggcactgaaagacacagaagaaaaaatcagccgctgcccgaagagaaggagagac
atccatgaggaactgctgaagagccaaaaggtcttctctgagaagctcaatcacctgagc
cgacgcctcgcctggataaatgtcaccatttattcaaaggagaagatgcaggatatctac
tggctgctgcgggtgtgcatccgcaccattgagcacggtgacaggacgggctcgctcttc
gctttcatgccagagttctacctcagcgtggctatgaacagctacagtgcactcaagaac
tacttcagccctgtaaacagcatggaggaacttccaggctacgatgagaccctgatgcgc
ctcgctgccatcctggccaagcattttgctgactcgaggattgtgggcacagacatccgg
gattccctgatgcaggccttggccagctacgtctgctacccccactcgctgcgtgctgta
gagaggatcccagaagagcagcggatctccatgatgaagaacctcctggctccctacgag
cagcggccctgggcacagaccaactggatccttgtcaggctgtggcggggctgtggcttt
gggtacagatacacacggctcccacacctgctgaaaacgaagcctgaggatgccagtctc
cccagcctgcagaagccatgtccctccaccctgctgcagcggcacatggcagacctgctg
cgcagtgaccgtgacctggcccccagcttcctcaacagcgtcctgaaccagctcaactgg
gccttctccgagttcatcggcatgattcaggagatccagcaggcagcagagcgcctggag
aggaactttgtggacagccggcagctgaaggtgtgtgccacctgcttcgacctgtcagtg
agcttgctcagggtgctggaaatgaccgtcacgctggcaccagagatcttcctcgactgg
aaccgcccgtcctcagagctgctgcttcggaggcttgcccagcttttgaaccaggtgctg
aaccgtgtgacagctgaaaggaacttgtttgacagagtggtcaacctccgtctgcctggc
ctggagagcgtggaccattacccaatccttgtggccgtgacgggcatcctggtccggctg
ctggtggacactgatgttcagggggccgagcgagcgacggcggtgctgctggcagatccc
tgcttccagctgcgctccatccagtacctgctgggccacgccgagccctcagccctggca
gctgctgccccggccacggacaagcgccatttctccctgcacacctacacagagtacatc
agtgctgaggagctggcaaaggtggagaagatgctgagccacctgagcgaggagtccaag
caggcagctgccaccacactgcccaccagcgaggaggacctgtgccccatctgctacgca
caccccatctccgccatcttcaggccctgctcccacaagtcatgcaaagcctgtatcaac
cagcacctgatgaacaacaaggactgcttcttctgcaaggccaccatcacgggggtggac
gacttcaccaagccagccagctcgtag
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integrated database retrieval system
