Empidonax traillii (willow flycatcher): 114061934
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Entry
114061934 CDS
T05887
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etl03041
]
114061934 (DHX9)
03012 Translation factors [BR:
etl03012
]
114061934 (DHX9)
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114061934 (DHX9)
5.6.2.6 RNA 3'-5' helicase
114061934 (DHX9)
Spliceosome [BR:
etl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114061934 (DHX9)
Translation factors [BR:
etl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114061934 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
AAA_22
AAA_14
ATPase
HMUD2
Motif
Other DBs
NCBI-GeneID:
114061934
NCBI-ProteinID:
XP_027748688
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MGDVKNYLYAWCGRRRLMPAYEIRAAGGRGRQTFLCEVRVEGFNYVGMGNSTNKKDAQSN
AARDFINYLVRVNEVKKEEVPAFGPAPGDAPDGAQEAARDVTGSSSALGGPLPPHLLLKS
EVGNGPGAAPGNCGSHGAQWDRGANLQDYYSRKEEQEGQETSESEVDLSADLHGGWTLEN
AKARLNQFFQKEKIQEEYKYTEMGPDHNRSFDAEMTIYVKQLGRRIFSREHGSNKKLAAQ
SCALSLVRQLYHLGVIEPYSGQTKKKGESLEPYEVSLSPDLENQLQRTVRELSLEIVPSP
EDPSNPVLISVGKLAHFEPSQRQSHMGVVPWSPPHSNWNPWTGCNIDEGPLANLTPEQIS
MDLKSDFLYRLEQDHELQRIQEEREALPLKNFESEILDAVRHNSVVVIRGATGCGKTTQV
PQYILDEHIRTGRAAECNIVVTQPRRISAVSVAERVSYERGEEPGQSCGYSVRFESVLPR
PHASILFCTVGVLLRKVETGIRGISHVIVDEIHERDINTDFLLVVLRDVIQAYPEIRVVL
MSATIDTSMFCEYFFNCPIIEVYGRTFPVQDYFLEDCIQMTQFVPPPKEKKKKEKDEESG
EDDDANCNLICSDEYGPETKHSMAQLNERETSFELIEALLIYIKTLNVPGAVLVFLPGWN
LIYTMQKHLEMNPRFGGHQYRILPLHSQIPLEEQRRVFDPVPPGVTKVILSTSIAETSIT
INDVVFVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRAGFCFHLCSRAR
FERLQTHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAERTLRELDA
LDSNDELTPLGRILAKLPIEPRLGKMMILGCIFYVGDAVCTISAATCFPEPFISEGKRLG
YVHRNFAGTRHSDHVALLSVFQAWDDARMGGEEAEKRFCEHKRLSMATLRMTWEAKVQLK
EILISSGFPEECLMTQPFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGHNAL
IHKSSVNCPFSSQDIKYPSPFFVFGEKIRTRAISAKTMTLVSPLQLLLFASKKVLSDGEL
VLVDDWIKLRMRHSAAACITALRAAVEGLVVEVSKDPGIVRHLEPAHERMLTAIRQLSRP
AAAGMALLPTNTR
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgtgaagaactacctgtacgcctggtgcggcaggaggaggcttatgcccgcc
tacgagatccgcgccgccggcggccgcggccgacagaccttcctgtgcgaggtccgagtg
gaagggttcaactacgtgggcatgggcaactccaccaacaagaaggacgcgcagagcaac
gctgcccgagacttcatcaactacctggtgcgggtgaacgaggtgaagaaggaggaggtc
cctgccttcgggccagccccaggtgacgcccctgatggagcacaggaagcagctagagat
gtcactggttccagttcagctctgggagggccccttcctccacatttgcttttaaaaagt
gaagtaggcaatggcccgggtgcagcacctggaaactgtggcagtcacggagctcagtgg
gatcggggggccaatttgcaagattattattcaaggaaagaggagcaagaaggtcaggag
acctcagagtcagaagtggacttaagtgctgaccttcatgggggttggaccttggaaaat
gccaaggcacgtctgaaccagtttttccaaaaggagaagatccaggaggaatataaatac
actgaaatggggcctgatcacaacaggagctttgatgcagaaatgaccatttacgtgaag
cagctgggcagaaggatcttcagccgcgagcacggctccaacaagaagctggcagctcag
tcctgtgccctgtccctggtcaggcagctctaccacctgggggtcatcgagccttactct
ggccagacaaagaagaaaggagagtcgctggaaccctacgaggtgtcactgtctcctgac
ttagaaaatcagctgcaaaggaccgtccgggagctgtccctggagattgtgccttcgcct
gaagatcccagtaatccagttctgatcagcgttgggaagttggcccactttgagccatcg
cagagacagagtcacatgggggttgttccctggtcacctcctcattccaactggaaccct
tggaccggctgcaatattgatgagggtcctctggcaaatctcactccagagcaaataagc
atggatctgaaaagtgatttcctgtaccggctggagcaggatcacgagttacagaggatc
caagaagagagagaggccttacccctgaagaattttgagagtgaaattctggatgccgtc
cgtcacaactctgttgttgtcatccgcggggccaccggttgtggcaaaaccacccaagtg
ccccagtacatcctggacgagcacatcagaaccggccgggctgctgagtgcaacatcgtg
gtgacacagccccggcggatcagcgcggtgtccgtggccgagcgcgtgtcctacgagcgg
ggagaggagccggggcagagctgcggctacagcgtgcgcttcgagtccgtgctgccccgg
ccccacgccagcatcctcttctgcaccgtgggtgttcttctgaggaaggtggagactggg
atccgtggcattagccacgtcatcgttgatgagatccacgagagagacattaatactgac
ttccttttggtggtgctgagggacgtcatccaggcctaccctgagatcagggtggtcctc
atgtctgccaccattgacaccagtatgttctgtgagtacttcttcaactgccccatcatc
gaggtctacggcagaacctttcctgtccaagattactttctggaagattgtattcagatg
actcagtttgttcctccaccaaaggagaagaagaagaaagaaaaggacgaagaaagtggt
gaagatgatgacgccaactgcaaccttatttgcagtgatgaatatggcccagaaacaaag
cactccatggctcagctgaacgagagagaaacctcttttgagctcattgaggccctgctg
atttacatcaagaccctgaatgtcccaggagccgtcctggttttcttgcctggctggaac
ttgatctacacgatgcagaagcatctagaaatgaacccccgcttcggaggccaccagtac
aggattttacctctgcattcccaaattcctctggaagagcagcgccgagtgtttgatccc
gtgcctcccggagtcaccaaagttattttatccaccagcattgccgagaccagcatcacc
atcaacgacgtggtcttcgttatcgactcctgcaagcaaaaagtgaagctgttcacggct
cacaacaacatgaccaactatgccacggtctgggcctcgaaaaccaacctggagcagcgc
aagggcagggccgggcgcgtgcgggccgggttctgcttccacctgtgcagcagagctcgc
tttgagaggcttcagactcacatgacgcccgaaatgttccggacgccgctgcacgagatc
gccctgagcatcaaactgctgcggctgggcgggatcgggcagttcctggccaaggccatc
gagccgccgcccctggacgcggtgatcgaggcggagcgaacgctcagagagctggatgcc
ctggattccaacgatgagttgacacctctgggaagaatcctggccaagcttcccattgag
cctcgtctgggcaagatgatgatcctgggctgtattttttacgtgggagatgctgtttgt
accatctctgcagccacctgcttccctgagcccttcatcagcgagggcaaacgcctgggc
tacgtccacaggaactttgctggcaccaggcactcggaccacgtggctctgctctctgtc
ttccaggcctgggacgatgccaggatgggtggcgaagaagcagagaagaggttttgtgag
cacaagagactcagcatggccaccctgagaatgacttgggaagcaaaagtccagctgaaa
gaaatactcattagttctggcttccctgaagagtgtctgatgactcagccgttcaacaac
accggcccagataataacctggacgttgtcatctccctgctggcctttggggtctacccc
aacgtctgctaccacaaggagaagaggaaaattcttaccactgaggggcacaacgctctc
atccacaaatcatctgtcaactgccctttcagcagccaggacatcaagtacccctcgccc
ttcttcgttttcggggaaaagattcgaacccgagccatctctgccaaaaccatgaccttg
gtgagccccctgcagctgctcctctttgcctccaagaaagtcctgtcagatggggagctc
gttctggtggatgactggatcaagctgcggatgcggcactcagcggccgcctgcatcacc
gccctgcgcgccgccgtggaggggctggtggtggaggtgagcaaagaccccggcatcgtc
cggcacctggagccggcacacgagcggatgctgacggcgatccggcagctgtcccggccc
gcggccgcgggcatggccctcctgcccaccaacacgaggtga
DBGET
integrated database retrieval system
