Empidonax traillii (willow flycatcher): 114062088
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Entry
114062088 CDS
T05887
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5 isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etl01009
]
114062088 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etl04040
]
114062088 (TRPC5)
Protein phosphatases and associated proteins [BR:
etl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114062088 (TRPC5)
Ion channels [BR:
etl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114062088 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
DUF1340
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
114062088
NCBI-ProteinID:
XP_027748942
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSAEEKAYLSAVEKGDYASVKHALQEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELLLSHSVYVGDALLYAIRKEVVGAVELLLNYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCVTIGLLFPMLSVAYLIAPKSRLGLFI
KKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTIVEWLILPWVLGFIWGEIK
EMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIVPSPKSVWYLCKWIHNQLCPGDESDNEQKRHENLKTFTERHADNLIQNQHYQEVIRN
LVKRYVAAMIRTSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVS
QKDETNEDSAGEKPRAKSVSFNVANKKKDFNVSALIKTMSGIDLVEEKPKSNGISKRSFV
RNGNRVQRLSSSKKESFKRLGLLFSKMNGHVPEPSSEPMYTISDGIIQPHYMWKDIKYSQ
IDREREENCSKSEINLNEVAYSGNTRLTGQSKECPVVCASSLHCASSICSSNSKLIDSSE
DVFDSWGEACDLFINQWKDGQEDHVTTRL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctatactacaagaaggtgaattactccccgtaccgagaccggatcccactg
cagatcgtgcgagccgaggcggagctgtcggcggaggagaaggcctacctcagcgccgtg
gagaagggggactacgccagcgtcaagcacgccctgcaggaggcagagatctactacaac
atcaacattaactgcatggatcctctgggtcgcagcgccctcctcatagccatagagaac
gagaacctggagatcatggagctgctgctgagccacagcgtgtacgtgggtgacgcgctg
ctctacgccatacggaaggaggtggtgggagctgtggagctgctgctgaattacaggaag
cccagtggtgaaaagcaggttccaaccttgatgatggacacccagttttcagagttcact
ccagacatcacacccataatgctggcggctcacaccaacaactacgaaatcatcaaactg
cttgtccaaagacgggtgacaatcccacgcccacaccagatcagatgcaactgcgtggag
tgtgtctccagctcggaggtggacagcctgaggcactccaggtcgaggctgaacatctac
aaagccttagccagcccttcattgattgccttatccagcgaggatcccattttgacggcc
ttccggctgggctgggagctgaaggagttgagcaaagtggaaaatgaattcaaggctgag
tacgaagaactttcccagcagtgcaagcggtttgccaaggaccttttggaccaagcacgg
agttcccgggagctggagatcattctcaatcacagagacgatcaaagcgaagagctggac
ccccaaaaatgtcacgatttggcaaagctaaaggtagcaataaagtatcaccagaaggag
tttgttgctcagccaaactgccagcagctgctagcaacactctggtacgatggttttcca
ggatggaggcggaaacactgggcagtcaaactcttgacctgcgtcaccatcggcctgctg
ttccccatgctgtccgtggcgtacctgatcgcaccgaagagcaggctgggactgttcatt
aaaaagccatttataaagtttatctgccacaccggctcttacctgaccttcctcttcatg
ctcctgctggcgtcgcagcacatcgtcaggactgaccttcacatgcagggaccacctccc
accatcgtggagtggctgatcctgccctgggttctaggttttatctggggagaaatcaag
gaaatgtgggatggtggattcaatgagtacgtgcacgactggtggaatctgatggatttt
gcaatgaactccctctaccttgcaaccatctcccttaaaattgtggcctacgtcaagtat
aatggttctcgcccgagggaggagtgggaaatgtggcacccgaccctcattgcagaggcc
ctctttgcaatatccaacattttgagttccttgcgtctcatatccctttttacagccaat
tcccacctggggcccttgcagatttctctgggacgcatgctgctagacatccttaaattc
ctttttatctactgcctggtgctcctggcttttgcaaacggactgaaccagctttatttt
tactacgagaccagtgcctcggaggagcccaacaactgcaaggggatccggtgtgagaaa
cagaacaatgccttctccacacttttcgagaccctccagtcgctcttctggtctgtgttc
gggctgctgaacctctacgtcaccaacgtgaaagccaggcacgagttcacggaattcgtc
ggggccactatgtttggcacctacaacgtcatctccctcgttgtgctgctgaacatgctc
atagccatgatgaacaactcctaccagctcattgctgaccacgcggatatcgaatggaag
ttcgcgcggacgaagctctggatgagttacttcgacgaaggtgccactctgccccctcct
ttcaacatcgtccccagccccaaatcagtctggtacctttgcaagtggatccacaaccag
ctgtgcccaggtgatgagtctgacaatgaacagaagaggcacgaaaacctaaaaacgttc
acagaaaggcacgctgacaacctgattcagaatcaacattaccaggaagtgataaggaat
cttgtgaagagatatgttgcagcaatgataaggacttccaaaaccaacgaaggtttaact
gaagagaatttcaaggaattgaaacaggacatctcaagttttcgctacgaggttcttgac
ctcttgggaaacaggaagccccagaggaggagttactccaccagcagcacggaggtgtcc
cagaaggacgaaacaaatgaggacagtgccggagaaaaaccccgagccaagagcgtgtct
ttcaatgtagccaacaagaaaaaggacttcaacgtgtctgctctcattaaaaccatgtct
ggcatcgacctcgtggaagagaagccaaaaagcaacgggatcagtaagcgctccttcgtc
cgcaacgggaacagagttcagagactgtccagctccaagaaggaatccttcaagagactg
ggcctgctcttctccaagatgaatggccatgtacctgaacccagttcagaacccatgtac
actatttcagatggaattattcagccccactacatgtggaaagacattaaatattctcag
atcgaccgagagagggaagagaattgttccaaaagtgaaattaacctcaatgaggtggcc
tacagtgggaacacgagacttacagggcagagcaaggaatgccctgtggtttgtgccagc
tcccttcactgtgcttccagtatttgttcctctaattccaaacttatagactcgtcagag
gatgtgtttgattcatggggagaggcctgtgacttgtttataaaccagtggaaagatgga
caggaggatcacgttaccactcggctctaa
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integrated database retrieval system
