Empidonax traillii (willow flycatcher): 114062306
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Entry
114062306 CDS
T05887
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04620
Toll-like receptor signaling pathway
etl04621
NOD-like receptor signaling pathway
etl04622
RIG-I-like receptor signaling pathway
etl05164
Influenza A
etl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114062306 (TRAF3)
04621 NOD-like receptor signaling pathway
114062306 (TRAF3)
04622 RIG-I-like receptor signaling pathway
114062306 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
114062306 (TRAF3)
05168 Herpes simplex virus 1 infection
114062306 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
MPS2
ATG16
zf-C3HC4_2
zf-RING_UBOX
FliJ
CEP104_ZnF
zf-RING_5
Sina_ZnF
Spc29
Tropomyosin
KxDL
GAS
zf-RING_6
DUF1664
Crescentin
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
114062306
NCBI-ProteinID:
XP_027749384
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MDTSKKSEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCRLILC
NPKQTECGHRFCETCMNALLSSSSPKCTACQESIAKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLRTDCQFEELPCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaaatcagagccccctttatctgtagaaatggtacaacaaagggcc
aatcctgaccgcagtccttcagcatccatttatgttccagagcaaggtggctacaaagag
aaatttgtaaatgccgtggaagataagtataaatgtgaaaaatgtcgcctcatcttatgc
aaccctaaacagactgaatgcggacacagattctgtgaaacctgcatgaatgccttgcta
agttcttctagcccaaagtgtacagcgtgtcaagaaagcatagcaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcagatatactgcagaaacgaaaac
aagggctgtaaggaacaactgtctttgggtcaattactgatgcatttgagaactgattgt
cagtttgaagaactcccgtgtcctcgtgctgattgcaaagaaaaaatactgagaaaagac
ttgccagaccatgtagagaagacctgtaaatatcgggagacaacctgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagactgcccatgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatcgacagccaagcagagaaactcaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaggccgacagcatgaagagcagtgtggaatccctccagaatagagtg
actgagctggaaagtgttgataaaactgcggggcaaggagctcggaatacaagcctgctg
gagacacagctgagcagacacgatcagatgctgagcgttcacgatatccgtctggctgac
atggacctccgattccaagttctggaaactgcgagttacaacggagtgctgatctggaaa
attcgagattataaacgtcggaagcaagaggcagtcatggggaagactctgtccttgtac
agccaacccttttatactgggtactttggctacaagatgtgtgccagagtttaccttaat
ggagatggcatgggaaaggggacgcacttgtctctgttctttgtcataatgcgtggtgaa
tacgatgctttgcttccttggccgttcaaacagaaagtgactctcatgctaatggatcag
ggaccgtctcggcgccacttaggagatgctttcaagccagatccaaacagcagcagtttc
aagaagccgactggagaaatgaacattgcgtctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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