Empidonax traillii (willow flycatcher): 114063733 Help Entry 114063733         CDS       T05887                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism etl  Empidonax traillii (willow flycatcher) Pathway etl04115   p53 signaling pathway etl04145   Phagosome etl04148   Efferocytosis etl04350   TGF-beta signaling pathway etl04510   Focal adhesion etl04512   ECM-receptor interaction etl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:etl00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     114063733 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     114063733 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     114063733 (THBS1)    04148 Efferocytosis     114063733 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     114063733 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     114063733 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     114063733 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:etl04131]     114063733 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:etl00536]     114063733 (THBS1) Membrane trafficking [BR:etl04131]  Endocytosis   Phagocytosis    Opsonins     114063733 (THBS1) Glycosaminoglycan binding proteins [BR:etl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    114063733 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS Laminin_G_3 TSP1_CCN EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  114063733 NCBI-ProteinID:  XP_027751995 LinkDB All DBs Position Unknown AA seq 1177 aa AA seqDB search MGPATALCLLLLVLGGSETKRTAESRNDDNSVFDLFELIGFMRKGGGRRAPGVYLVKGPE SSSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGS GHVFSLVSNGKAGSLDLSLSGDGKQQLVSVEDVLLATGHWKNITLFVQEDRAQLYVGCEK MENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCS SSTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTL QDRVRKVTEENEIIAKVVQITPGACIHNGILHKNKDEWTIDSCTECTCQNSATICRKVSC PLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRC EGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKP CEGEARENKPCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVG EARGTQVCNKQDCPIDGCLSNPCFAGATCTSSPDGSWKCGACPAGYHGDGIHCQDIDECK EVPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMTNKQVCKPRNPCTDG THDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHC KKDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDR CDNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQC DNCPLEHNPDQEDTDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDA CDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVEIS ETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFF INTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPG EHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMA DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3534 nt NT seq  +upstreamnt  +downstreamnt atggggccagcgactgcgctctgcctcctgctcctcgtgctcggaggctcagagaccaag cgcaccgcagagtccaggaatgatgataacagtgtttttgatctctttgaactcattggc ttcatgcggaagggaggtgggcgccgggcacccggggtgtacctggtgaagggaccagaa tcctccagccctgcttaccgcattgaggatgccagtcgcatccctgctgtccctgactca aagttccaagacttattagatgccattcatgctgagaagggcttcatcctcctggccact ctccggcaagccaagaaaagcagaggcacgctcctgtctgtggaacagaaagatggctct ggtcatgtcttcagtctagtatcaaatggcaaggcaggctccctggacctgagcctttct ggtgatggcaagcagcaattagtgtcagtagaggatgtcttgctagctacaggacactgg aagaatatcaccctgtttgtgcaggaggaccgagctcagctctatgtggggtgtgaaaaa atggagaatgctgaactggatatccccatccagaacatcttcactagggacttggccagc agtgccaggctccgtattgccaaagggggagtcaatgacaacttccagggactgctgcag aatgtgcggtttgtgtttggaacaactctggaaactatcctgaggaacaaaggctgctcc agctccactagtgcaatcattactttggacaatcccatcaatggttccagcccagctatc cgcactaattacattggccataaaacaaaggacatccaagcagtctgcggattttcctgt gatgaactaacaaatatgtttgtggaactgcaagggcttcggtccatggttacaacactt caagacagagttcgcaaagtgactgaagaaaatgaaatcattgccaaagtggtccagatc actcctggagcatgcattcataatggaatcttgcacaaaaataaagatgagtggactatt gacagctgcactgaatgtacttgccagaactctgctactatatgccggaaagtgtcctgt cctctcatgccttgttccaatgccactgtgcctgatggggagtgctgtccccggtgctgg cctagtgactatgccgatgatggatggtctccttggtctgaatggacctcatgttcagtg acctgtggtaatggaattcagcagagaggacgttcctgtgacagtctcaataaccgctgc gaagggtcttctgtgcagactcggacctgccaccttcaggagtgcgataagagatttaaa caggatggtggctggagtcactggtcaccgtggtcgtcatgttctgtcacttgtggcacg ggcatcatcactagaattcgtctctgcaactctccagtaccacagctgaatggcaaacct tgtgagggtgaggcaagagaaaacaaaccctgccagaaagatccttgcccaattaatggc aactggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggacttcaa aaacgtagccgtctctgcaataatcctgagcctcagtatggagggaagacttgtgtaggt gaagctagagggactcaggtctgcaacaaacaggactgtccaattgacgggtgtctgtct aatccctgctttgcgggggctacatgtaccagctcccctgatggttcctggaagtgcggt gcctgtcctgctggctaccatggtgatggcattcactgccaagatattgatgagtgcaaa gaggttcccgatgcctgctttgtcttcaacggtgtgcacaggtgtgagaatactgaacct gggtacaactgtctgccttgtccaccacgtttcactggaacacagccatttggtcgcagt gttgaggatgccatgactaacaaacaggtctgcaagccacgtaatccatgcactgatgga acacatgactgcaacaagaatgccaaatgcaattaccttggccacttcagtgaccccatg tatcgctgtgaatgtaaaccaggctatgctggtaatggcataatttgtggagaagatact gacttggatggatggccaaatgagaaccttgtttgtgttgccaatgccacttaccactgt aaaaaagataactgccctaatctgcctaactctgggcaggaagactatgataaggatggg attggtgatgcctgtgacaatgatgatgatgatgatggcattcctgatgaccgggacaac tgtccatttatctacaacccccagcagtatgactatgacagggatgatgttggtgaccgc tgtgataactgtccctacaatcacaaccctgatcaaacagacactgacaataatggagaa ggagatgcgtgtgcagtagatattgatggagatggggtgcttaatgaaagggacaactgc cagtatgtctataatgtagaccagagggatacagacttggatggtgttggagatcagtgc gataactgtcccctggaacacaatcctgaccaggaagacaccgattctgaccgcatagga gatcagtgtgacaacaaccaggacatagatgaagatggccatcaaaataatcttgataac tgcccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcc tgtgaccatgatgatgacaatgatggtatccctgatgacaaagataactgcagattggtt gccaacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgac tttgaccaagacagtgtgccagacattgatgatatctgccctgaaaatgtggaaattagt gagactgatttccgaagatttcagatgattcccctggatcccaaaggaacgtcccaaaat gatccaaactgggttgttcgtcaccagggtaaagaactggttcagacagtgaactgtgac cctggccttgcagtcggttttgatgaattcaatgctgtggacttcagtggtaccttcttc atcaatactgaaagggatgatgactatgctggctttgtatttggctaccaatctagcagt cgtttctatgttgtcatgtggaagcagatcactcagtcttactgggactccacaccaacc aaagctcaaggctactcaggtctctccatcaaagttgtgaattccaccactggtccagga gaacaccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactttg tggcatgatcctcgtcacataggctggaaagacttcactgcatacagatggcgtcttagc catagaccaaagactggcttcatcagggttgtaatgtatgaagggaagaaaatcatggca gactcaggaccaatctatgataaaacctatgctggtggtcggctaggattatttgtcttc tctcaagaaatggtgttcttctcagatcttaaatatgaatgcagagatccataa

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