Empidonax traillii (willow flycatcher): 114066016
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Entry
114066016 CDS
T05887
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04514
Cell adhesion molecules
etl04520
Adherens junction
etl04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114066016 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114066016 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
114066016 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etl01009
]
114066016 (PTPRF)
Enzymes [BR:
etl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
114066016 (PTPRF)
Protein phosphatases and associated proteins [BR:
etl01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
114066016 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
V-set
DSPc
Y_phosphatase3
C2-set_2
PTPlike_phytase
Ig_C17orf99
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
114066016
NCBI-ProteinID:
XP_027756176
LinkDB
All DBs
Position
Unknown
AA seq
1922 aa
AA seq
DB search
MVPNFCIPVLTVPAAILCCLMLPSAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSI
PPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANY
TCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKP
KSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSP
PLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVG
SLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPAS
QERITKYELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTI
EARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKH
VVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESVPVLVRTDEDVPSAPPRKVEV
ESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDS
VDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTAL
IQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFRLSAKNR
AGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWEPPVLAERNGKIVNYTVVYRD
INSQQDLFNITRDTSITLTNLKPDTTYDIKVRARTNKGAGPLSPSIQSRTMPVEQVFAKN
FRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVL
MNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVV
PADQSTSTPTARWRTPDEMELDQLLEAINQGSQSRRQRRQADRLKPYIAAQVDVLPETFT
LGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPE
MLWVMGPVLAVILIIIIVIAILLFKSKQERKRAHSPSSKDEHSIGLKDSLLAHSSDPVEM
RRLNYQTPGASVACCPNISSMRDHPPIPVSDLADNIDRLKANDGLKFSQEYESIDPGQQF
TWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQG
PLPETLSDFWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLLDTVEL
ATYTVRTFALYKNGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMV
VHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALL
EAATCGNTEVPARNLFAHIQKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNK
FKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWR
MLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVT
DARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGR
TGVFITLSIVLERMRYEGVVDMFQMVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHY
AT
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcatcccagtactcactgtgccagcagccatcctctgctgcctg
atgctgccttcagcaggagcggacagcaagccaacgtttatgaaagctcctgaagatcag
attgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacatggatgaagaaggggaagaaagtcagttctcagcggtttgaggttattgag
ttcgatgatggatcgggatcagttctgcggatacagcccctgcgtgttcaccgagacgaa
gcgatctacgagtgcacagcaaccaacagcgtcggggagataaacacgagtgccaaatta
acagtgttagaagaagaccacctcccagctggcttcccaaccatcgacatgggccctcag
ctgaaggtggtggagaaggcccgcacggccacaatgctctgtgccgccagcggcaacccc
gatcccgaaatctcctggtttaaggacttcctgcccgtcgacaccgcgaccagcaacgga
aggatcaagcagctccgctcgggtggtacaccgatcagaggagctctgcaaatagagaac
agtgaggagtcagaccaaggcaaatacgaatgtgttgcaaccaacagcgcaggaacccgc
tactctgccccagccaacctttatgttcgagtgcggcgtgttgctcctcgattctctatc
cctccgagcaaccatgaggtgatgcctggggggagcgtgaacctcacgtgcgtggcagta
ggtgcccccatgccctacgtgaagtggatggccggtgtggaggagctgaccaaagaggac
gagatgcccgtcggtcggaacgtcctggagctcaataacatcatgcagtctgccaactac
acctgcgtggccatctcctcccttggcatgatcgaagccacagcacagatcactgtcaaa
gcgctgccaaaacctccaacagagccattagtgactgaaacgacagctaccagcgtgacc
ctcacctgggattcgggcaactccgaccccatttcgtattatgtcatccagtacaagccc
aaatccttggagggtcagttccaggaggtggatggcgtggcaacgacccgctatagcata
ggtgggctcagccccttctccgagtatgaattccgggtcatcgcagtcaataacattggc
aggggtccccccagtgaactggtcgaggcccggacgggagaacaagctccttcgagcccg
cccctcaaagtccaggcacggatgctgagtgccagcaccatgctggtccagtgggagcag
ccggaggagccgaacgggcagatccgagggtaccgcgtgtactacaccaccgacccgcac
ctgcccctgagcatgtggcagaagcacaacacggacgacagccacctcaccactgtgggc
agcctcatcacgggcaccacctacagcatccgcgtcctggccttcacttcggtgggcgac
ggacccccctcggacatcatccaggtcaaaacgcagcaaggggttcccgcccagccagct
gacttccaggcagaagcagagtctgatacccgcatcctgctgacgtggctgcccgcctcc
caggaacgcatcaccaaatatgagctgctgtactgggaaggggaggatggcactcagcaa
aaggtggagtttgacccaacctcctcatacgccgtggaaggtctcaaaccagacacgctg
tataagttccgtctgggtgcccgctcagagctgggcgtgggagtttacacccccacgatc
gaagccagaactgcccaatccaccccctccgccccaccccaagaagtcgagtgtgtaagc
accagctccactaccatccgggtaagttgggtgccaccgcctgcccagagccgcaatggg
gtcatcacccagtactccattgcctaccaggcagtggaaggagatgacaacaccaagcat
gtggtggatggcattggacgggagcactccagctgggagatcaaggacctggagaaatgg
accgagtacaaggtgtgggtaagggctcacacggatgtggggccaggaccggagagcgtc
cccgtgctcgtgcgcactgatgaggatgtgcccagtgccccaccacggaaggtggaggtg
gagtctgtgaactcgactgccatccgggtgagctggaagctgcccatctccaacaagcag
cacgggcagatccgcggctaccaggtgacctacgtgaagctggaaaacaacgagccccga
gggcagccggtgatcaaggatgtcatgctgtcagaagcacagtggagagctgaggactcc
gtcgaccatgagactgtcatcggaggcctgctgccagaaaccacctactccgtcacagtc
gctgcctacaccaccaaaggggatggtgcccgcagcaagcccaaagtcatcaccaccacg
ggggcagtcccggggaagcccaccatgatgattagcacgacagccatgaacacagccctc
atccagtggcacccacccaaggagatggtaggggagctgctgggttaccggctgcagtac
agacgcctggatgaggagaaaatgaacacgatagacttcgggaagagagaccatcactac
accgtgaccaacctgcacaagggggccacgtacctcttcagattgtctgccaagaacaga
gctggcccgggagaggagtttgagaaggagatcaccactgctgaagacgtgccgagcggc
ttcccgcagaacctgcgcgtggtgggtctcaccacttccaccacagaggttgcctgggag
cccccggtcttggcagaaagaaatggcaagatcgtgaactacacggtggtatacagggac
ataaatagccagcaggacctgtttaacatcaccagggacacaagcatcactctgacaaat
ttgaaacctgataccacttacgacatcaaagtgagggcccgcaccaataagggggctggg
ccgctcagccccagcatccagtcccggaccatgcctgtggagcaagtgtttgctaagaac
tttcgcgtcaatgccgtcatgaaaacgtctgtgttgctgagctgggaagtgcctgactcc
tataaatctgcagtgccttttaagattctctacaatagccagagtgtggaggtggatggc
cactccatgaagaagctcataagtgacctccagcccgacacggactattcctttgtgctg
atgaaccgtgggagcagtgctggggggctccagcacctcgtctcaatccgcactgctccc
gacgtcttgcagagcaaacccatcgccacaaacaagtacatacaggagggaaaattcaca
ctcacccttcccaaagtgcagaccaccgtgccagttaggtggtactacatcgtggtggtg
ccagcagaccagagcaccagcaccccgactgctcggtggcggacacctgatgagatggag
ctggaccagttgctggaggccataaaccaagggagtcagagcaggcgccagcgacgccag
gcagacaggctcaagccctacatcgctgctcaagtggatgtgctgcccgagaccttcacc
ctgggggatgagaagaactacaaaggtttctacaacaagcccctgtcccaagacctgagc
tatcgctgcttcgtgctggcctcgctggaggatggggacacgaagagatatgcggccagc
ccctactcggatgagatcgtgatggaggtggcttcggcaaagcagcaagatgaaccagag
atgctctgggtgatgggacccgtcctggccgtgatattaatcatcatcattgtcattgcc
atactcctcttcaaaagtaagcaagaaaggaaaagggcacactccccctcttccaaggat
gagcactccatcggcctgaaggactcgctcttggcccactcctctgacccagttgagatg
aggcgactcaactaccagactccaggtgccagtgtcgcctgctgcccgaatatctcaagc
atgcgcgaccacccccccatccccgtgagcgaccttgccgacaacatcgaccggctgaag
gccaacgatgggctcaagttctcccaggagtacgagtccattgatccgggtcagcagttt
acctgggagaactccaacctggaagtgaataaacccaagaaccgctatgcaaacgtgatt
gcctacgaccactcacgtgtcatcctgacctccatcgatggagtccccggcagtgattac
atcaacgccaattacattgatgggtatcggaagcagaacgcctacatcgccacacaggga
cctctgccagaaaccctcagcgacttctggaggatggtgtgggaacagagaacagcaact
atagtcatgatgaccaggctggaggagaagtccagggtgaagtgtgaccagtactggccg
agccggggcacagaaacctacgggatgatccaggtgacgctgctggacacggtcgagctg
gcgacctacaccgtccgcaccttcgcgctgtacaagaacggctccagtgagaagcgagag
ctgcggcagttccagttcatggcttggcccgatcacggggtaccagaataccccacccca
atcctcgctttcctgcgacgggtcaaggcctgtaacccaccagatgctgggcccatggtc
gtgcattgcagcgccggcgtgggccggaccgggtgcttcatcgtcatcgatgccatgctg
gagcggatgaagcacgagaagaccgtggacatctacggccacgtgacgtgcatgcgctcc
cagcgcaactacatggtgcagacagaggaccagtacatcttcatccacgaggccttgctg
gaggctgccacgtgcggcaataccgaggtgcctgcacgcaacctcttcgctcacatccag
aagctgacccaggtgccgccgggcgagagcgttaccgccatggagctggaattcaagctg
ctggccaactctaaagcacatacctcacgtttcatcagtgccaacctcccgtgcaacaaa
ttcaagaaccgcctggtgaacatcatgccatacgagctgaccagagtgtgtctgcagccc
atccggggtgtcgagggctctgattacatcaatgccagcttcatagatgggtacaggcag
cagaaggcctatattgccacacagggaccgctggccgagaccacggaggatttctggcgg
atgctctgggagcacaactccaccatcgtggtgatgttgacgaagctgcgtgagatgggc
cgggagaagtgccatcagtactggcctgcagagcgctctgcccggtaccagtacttcgtg
gtggaccccatggcagagtacaacatgccacagtacatcctccgggagttcaaggtgacg
gatgccagggacggccagtcacggaccatccgccagttccagttcacggactggcctgag
cagggagtgccaaagacgggagagggcttcatcgacttcattgggcaggtgcacaagacc
aaggagcagtttgggcaggatgggcccatcacagtgcactgcagcgctggggttgggcgc
acaggcgtgttcatcacgctcagcatcgtgctggagaggatgcgctacgagggggtggtg
gacatgttccagatggtgaagaccttgcggacgcagcggccagccatggtgcagacagag
gaccagtaccagctgtgctacagagccgcgctggagtatcttggcagcttcgaccactat
gcaacgtaa
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integrated database retrieval system
