Empidonax traillii (willow flycatcher): 114066451
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Entry
114066451 CDS
T05887
Symbol
NPC1L1
Name
(RefSeq) LOW QUALITY PROTEIN: NPC1-like intracellular cholesterol transporter 1
KO
K14461
Niemann-Pick C1-like protein 1
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
etl02000
]
114066451 (NPC1L1)
Transporters [BR:
etl02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
114066451 (NPC1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
NPC1_MLD
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
114066451
NCBI-ProteinID:
XP_027756949
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MVESLALPSALLAALLAVASPSFTPIHRAGYCAFYGECGRNPEVNVSLVPSNVPCLSNTP
AREATGPLLDLLRTVCPDLVRGDNETTLVCCTYGQLSALQLSVALSGTVLARCPSCARNF
ANLYCHNTCSPDQSLFTNVTRVVNRTVVPGVPRVAVVEYQSFYRQRFADAAFSSCRGVRL
PATGGFAIATMCGRYGAQLCTTQRWLDFQGDKNNGLAPLQINFQLVPNGTEPGDAIEPLD
VRVWRCSEAPSEDEEPCSCQDCAESCPSVVPPTDPPPPFRLGEADGVLVLCILLFGFLAM
TFLVSLMCQRRSKGATVPQAVPTARGCSERVGNASHRALAQAFRWWGTWVAAQPVIVLVV
AVVVAGGLSAGLVTLRLTTDPVELWSAPGSRARQEKTFHDQHFGPFMRTNQIIVTAPGKA
GSLYDSVVFGAKNFSGVLAQDVLWALLELQERLAGIEAWAPQAGRNVTLRDVCYAPLNPT
EPTLGDCCVNSVTQYFQNNRSHLALTALQEDGKETGTVDWRDHLIYCVNSPLSFKDITAL
ELSCTADYGGPVFPYIAFGGYQDSEYTEAEALIITYSLNNFPSGDPRLEWVLSWERQFLE
VVQDFQRSHSLNLSVTFMAERSLEDEINRTSGEDLPVFAISYLLVFAYIALALGEYTAWS
RVLVDSKVTLAVGGIIVVLGAVMASMGFLALLGVPSSLIILEVVPFLVLAVGADNIFIFV
QEFQQSQREPGETREQHLGRVLAQVAPSMLLCSISETICFLLGALSSMPAVRTFALTAAL
AIAFDFLLQMSGFVALVALDTRRQEVPPGGLCGMGHGGWRGPGGLGANLGAGGSRGKLEG
VXGAGGPXPGTLQVLLFLFLACAGLFLMFQVSVGLDQELALPKDSYMLQYFSALNQYLAV
GVPTYFVTTGGYNFSSANGTNGICSSAGCDPDSLTQTIQHATSFPNVSYLAIPATSWVDD
FLDWLNPTSRCCRIHQFGQHKGEFCPSTNNNLSCFGGRCLKVLRRPTAEEFQRFLPWFLQ
DRPTLQCAKGGLGAYDTSVSMTENGTILATRFMAYQRPLRTSQEYTAALRAARALGDTLT
RTLRRVPGTDPHFRVFPYTVTYVYYEQYLTVVAEGLVTLALCLVPTFAVSFLLLGMDLRS
SCATLITITMILLDTVGAMALWDVPYNAVALINLVAAVGISVEFVSHITCAFARSAQPSR
VARAAEATITMGSKVVAGVAMTNLPGVVVLAFAKAQLIQIFFFRLNLIITLVGLAHGLVF
LPVLLSYIGPCPQVPAGDTPGDTQGAGLGLGNPYFKDKDKDKPEKG
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggtggagtccctggcgctgcccagcgccctcctggcagccctgctggcagtggcctcc
ccgtccttcaccccgatccaccgcgccgggtactgtgccttctacggcgagtgcgggcgc
aaccccgaggtgaacgtgtcgctggtgccctccaacgtgccctgcctgtccaacacccct
gcccgggaggctacggggcccttgctggacctgctgcgcaccgtatgcccggacctggtg
cggggggacaacgagaccaccctggtgtgctgcacctatgggcagctcagcgcgctccag
ctcagcgtcgcgctctcgggcaccgtcctggcacggtgcccgtcctgtgcccgcaacttt
gccaacctgtactgccacaacacctgcagccctgaccagagcctgttcaccaacgtgacg
cgggtggtgaaccgcacggtggtgcccggggtgccccgcgtggcagtggtggagtaccag
agcttctaccgacagcgcttcgccgacgccgctttctcctcgtgccgaggggtgcggctc
ccggccaccggcggcttcgccatcgccaccatgtgcggacgctacggtgcccagctctgc
accacccaacgctggctggacttccagggcgacaaaaacaacgggctggcaccgctacag
atcaacttccagctggtgcccaacggcaccgagccgggcgatgccatcgagccgctggac
gtgcgggtctggcgctgcagtgaggcgccaagtgaggatgaagagccctgctcgtgccag
gactgtgccgagtcctgcccatcagtggtgccccccacagacccaccgcccccgttccgg
ctgggcgaggccgatggtgtcctggtcctctgtattctgctcttcggcttcctcgccatg
actttcctcgtgtctctgatgtgtcagcggcgctccaagggagcgacggtgccgcaggct
gtgcccactgcccgcgggtgctcggagcgggtgggcaatgccagtcaccgggcccttgcg
caggcgttccgctggtgggggacatgggtggccgcacagcccgtgatagtgctggtggtg
gccgtggtggtggccggggggctctcggccgggctggtgaccctccggctcaccacggac
cctgtggagctctggtctgcgccgggcagccgtgccaggcaggagaagaccttccacgac
cagcacttcgggcccttcatgcgcaccaaccagatcattgtgacggcaccgggcaaggct
gggtctctctacgactccgtggtcttcggagccaagaacttcagtggggtcctggctcag
gatgtactgtgggcgctgctggagctgcaggagcggctggcgggcattgaggcctgggca
ccgcaggcgggcaggaacgtgacgctcagggatgtgtgttatgcccccctgaaccctaca
gagcccaccctgggcgactgctgtgtcaacagcgtcacccagtacttccagaacaaccgc
tctcacctggcactcaccgccctgcaggaggatggcaaagagacgggcaccgtggactgg
cgcgaccacctcatctactgcgtcaactccccgctctccttcaaggacatcacggcgctg
gagctgagctgtacggctgactatggcgggcccgtgttcccatacatcgccttcggggga
taccaggactcagagtacacggaggccgaagctctgatcatcacgtactccctgaacaac
ttccccagcggtgacccccggctcgagtgggttctgagctgggagcgccaattcctcgaa
gtggttcaggatttccagcgctcacacagcctcaacctgtcggtcactttcatggccgag
cgctccctggaggacgagatcaaccgtacgagcggggaggacctgccggtgttcgcaatc
agctacctgctggtgttcgcctacattgccctggccctgggcgagtacacggcctggagc
cgcgtgctggtggattcgaaggtgacgctggcagtagggggcatcatcgtggtcctgggg
gccgtgatggcctccatggggttcctggcactgctgggggtgccttcgtccctcatcatc
ctcgaggtcgtgcccttcctcgtgctcgctgtgggcgctgacaacatcttcatcttcgtg
caggagttccagcagtcacagcgggagccaggcgagacgcgggagcagcacctggggcgg
gtgctggcacaggtggcacccagcatgttgttgtgcagcatctccgagaccatctgcttc
ctcctgggtgccctctcatccatgcctgccgtgcgaaccttcgccctcacggccgccctc
gccatcgccttcgacttcctgctccagatgtcggggtttgtggcactggtggcactggac
acccggcggcaggaggtaccacccggggggctctgtgggatgggacatgggggctggagg
ggaccagggggtttgggagcgaatttgggggctgggggttcccgggggaagctggagggt
gtctagggtgctggaggtccctgaccaggtaccctccaggtgctgctgttcctgttcctg
gcctgtgccgggctattcctgatgttccaggtgtcagtggggctggaccaggagctcgcg
ctgcccaaggactcgtacatgctgcagtacttctcggcactgaaccagtacctggctgtg
ggagtgcccacctacttcgtcaccacgggcgggtacaacttctcttctgccaacggcacc
aacggcatctgctccagcgccggctgtgaccccgattcgctcacccagaccatccaacac
gccaccagcttccccaatgtgtcctacctggccatcccagccacctcctgggtggacgat
ttcctggactggcttaaccccacgagccgctgctgccgcatccaccagttcgggcagcac
aagggggagttctgcccctccaccaacaataacctgagctgtttcggggggcggtgcctg
aaggtgctccggcgccccacggccgaggaattccagcgcttcctgccctggttcctgcaa
gaccggcccaccctgcagtgtgccaaggggggcctgggcgcttacgacacttccgtgagc
atgaccgagaacggcaccatcctggccacccggttcatggcgtaccagcgcccactgcgc
acctcgcaggagtacacggcggctctgcgggcagcccgcgccctgggcgacaccctgacc
cgcaccctgcgcagggtgcccggcacagacccccacttcagggtgttcccctacacggtg
acgtatgtgtactacgagcagtacctgacggtggtggccgaggggctggtgacactggca
ctgtgcctggtgcccacctttgccgtgtccttcctgctgctgggcatggacctgcgctcc
agctgtgccaccctgatcaccatcaccatgatcctgctggacaccgtgggggccatggct
ctctgggacgtgccctacaacgccgtcgccctcatcaaccttgtagcggccgtgggcatc
tcagtggagtttgtgtcccacatcacgtgcgccttcgcccgcagtgcccagcccagcagg
gtggcacgagccgccgaggccaccatcaccatgggcagcaaggtggtggccggggtggcc
atgaccaacctgcctggggtggtggtcctggccttcgccaaggcccaactcatccagatc
ttcttcttccgcctcaacctcatcatcaccctggtggggttggcacatggcctggtcttc
ctgcccgtgctcctcagctacatcgggccctgtccacaggtgccagcaggggacacgccg
ggggacacacagggtgcagggctgggccttggcaacccctacttcaaggacaaggacaaa
gacaagcccgagaagggctga
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