Empidonax traillii (willow flycatcher): 114067686
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Entry
114067686 CDS
T05887
Symbol
PLXND1
Name
(RefSeq) LOW QUALITY PROTEIN: plexin-D1
KO
K06822
plexin D
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
114067686 (PLXND1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
114067686
NCBI-ProteinID:
XP_027759083
LinkDB
All DBs
Position
Unknown
AA seq
1866 aa
AA seq
DB search
MHCAARRRGRRDGSGPGXAGAELRPPALLPPLLLLLLPLLLPDPAAGLEVQRKFLSPTPT
NNFALDGPGSRVYLAAVNRLFQLSGGELALEAEAAVGPVLDSPLCHAPQLPQASCEHPRV
LTNNYNKILQPDPEQGVLVVCGSIYQGLCQLRSMANISAVAVRFPPGGSDSVTVFPSMLN
VAANHPNASTVGLVLRRGGGGGGARLLVAATYTGFGSPFFPRNRSLEDHRFENTPEIAIR
ALNARGDLAKLFTFDINPSDDNILKIKQGDKARHKLSFVRAFLQRGAAPRARRPYAYLAL
NSEANAGDKESPAHSLLARICLGEPAEATLNGSGETKKLTESYIQLGLRCGGAADAFTRL
VSVFPARAAWRSPAAPPDPGPAPAPAPPAPEELLFGVFERAGAGGAGGRPQSALCVFRFA
EIEETIRAARNSCFVSPTAGMVTVLDSVVQGTGPACEKRNIQLQPEQLDCGAAHLQHPLA
IVNPITATPIFTYSGLTAVAVASVNNYTVVFLGTASGGLLKINLDTTMKVISRRSISVAY
GEPVHPIMQFDPSDPTYLYLMTSYQVRFSVLIKTCDACGASSDSYCGWCTMETRCSLQHE
CTNSTGANFWASVSEGVQQCPSMTILEPEINIDKENPALIIQINGTIPNLNGTNISCDYG
NNIHTVARVAGDYVNQFIYCSLLPREKYPAFPDDQDHVVVETALRVNSKNIIQANFTIYD
CKRTGNIYPKRACTSCLSARWKCHWCPSTYTCVSNHSQCVSALQMKKKIDCPRIVPAPLE
PMPTGVSRDITISLANATFSKETALECHFGTDRTFEARWVNSSAVECVHVLIEPLHGPLE
GGTLLTIRGRNLGRRFSDVLAAVRVGSVHCAPLPDRYVVSEMIVCQTGEAQEAFSDVVTV
NVSREGKSRERYSYVLPLVQSIAPPNGPKAGGTRVTIRGSRLDVGSELRVLINSSKQCTD
LSRTDSTITCTMPAAELTTPVPVCVQFENKSCASLNITFKYEKNPVISDINPKKSQISGG
RIITLEGRGFGLVQNVSMAVRGIGREHTCCKVHTDTTITCPSPAASNITVGSKPAPVDFY
LNGRLYADDRPALDEEMYPEEALHFSKFSLEYYADPQFSTAKKEKWIKHHPGEPLTLVIH
KEPDSLGLESNEYQVKIGLISCEIQIVSDKVIHCSINESLSTSERQLPVTIQVGKFNYTI
AMLHLGGGETAIIVSIVICSILLVLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQIRE
EIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEECYVLPSQQLSS
QVGSQVQETHPLLVGEWKIPENCRPNMEEGISLFSTLLNNKHFLIVFVHALEQQKDFAVR
DRCNLASLLTIALHGKLEYYTSIMKDLLVDLIDASASKNPKLMLRRTESVVEKMLTNWMS
ICMYSYLRETVGEPFFLLICAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRNLN
VSFQGCGMDSLSVRAMDTDTLSQVKEKILEAFCKNVPYSQWPRVEDVDLEWFATSTDSYI
LRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLSDKKDTTLSRVKDLDTEKYFHLVLP
TDESVEHKRSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIRDDKPPVAVKY
FFDFLEEQAEKRGITDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIDKTDHIDACLSVIA
QAFIDACSLSDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIHDMSPLSEQEMNAHLAE
ESRKYRNEFNTNVAMAEIYKYAKRYRSQIVAALDANPTTKRTQLQHKFEQVIALMEDNIY
ECCSEA
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atgcactgtgcggcgcggcggcgcgggcggcgggatggctccggtccgggcnnggcgggc
gctgagctgcggccccccgcgctgctaccgccgctgctgctgctgctattgccgctgctg
ctgcccgaccctgccgccggcttggaggtgcagcgcaagttcctctctcccactcccacc
aacaacttcgcgctggacggccccggctctcgcgtctacctggcggccgtcaaccggctc
ttccagctgtcggggggcgagctggcgctggaggcggaggcggctgtggggccggtgctg
gacagcccgctgtgccacgcgccgcagctgccacaggcctcctgcgagcaccccagggtg
ctcaccaacaactacaacaagatcctgcagccggaccccgagcagggcgtcctcgtcgtc
tgcggctccatctaccagggcctctgtcagctgcgcagcatggccaacatctcggcggtg
gccgtgcgcttcccgccgggcggcagcgactctgtcaccgtctttcccagtatgctgaac
gtggcggccaaccaccccaacgcctctaccgtggggcttgtgctgcgccgtggcggcggc
ggcggcggggcgcggctgctggtggccgccacctacaccggcttcggcagccccttcttt
ccccgcaaccgcagcctggaggaccaccgcttcgagaacacgcccgagatcgccatccga
gccctcaacgcccgcggcgacctggccaagctcttcactttcgacatcaacccctccgac
gacaacatcctcaagatcaagcagggcgacaaggcgcggcacaagctcagcttcgtccgc
gccttcctgcagcgcggggccgcgccgcgcgcccgccgcccctacgcctacctggcgctc
aacagcgaggcgaacgcgggcgacaaggagagcccggcgcacagcctgctggcccgcatc
tgcctgggcgagccggccgaggccaccctcaacggcagcggcgagaccaagaagctgacc
gagtcctacatccagctggggctgcgctgcggcggcgccgccgacgccttcacccgtctc
gtctcggtcttcccggcgcgggcggcttggcgcagccccgccgcgccccccgaccccggc
ccggccccggccccggccccgccggcccccgaggagctgctcttcggcgtcttcgagcgg
gccggggccggcggcgccggggggcggccgcagtccgcgctctgcgtcttccgcttcgcc
gagatcgaggagacgatccgggccgcccgcaactcctgcttcgtcagccccactgccggc
atggtcaccgtgctggacagcgtggtacagggcaccggcccggcctgcgagaagaggaac
atacagctgcagccggagcagctggactgtggagcagcacacctccagcacccgctggcc
atcgtgaaccccatcacagccacccccatcttcacttacagcggcctgaccgcggtggcg
gtggccagcgtcaacaactacactgttgtgttcctgggcactgccagtggaggactcctg
aagattaacctggacactaccatgaaggttattagcaggagatccatttctgtggcttac
ggagagcctgtccaccccatcatgcagtttgacccttctgatcccacctatctttacctg
atgacttcctaccaggtgagattttcagtcctcatcaaaacatgtgatgcttgtggtgcc
tcctctgactcctactgcgggtggtgcacgatggagaccaggtgttctttgcagcatgag
tgcaccaactccacaggggccaacttctgggcgagtgtgagtgaaggagtgcagcagtgc
ccctccatgaccatcctggagcctgagatcaatattgacaaagagaacccggccctgata
atacaaataaatggaactatcccaaacctgaatggaacaaatatttcatgtgactatgga
aacaacatccacacggtagccagagttgctggagattacgtaaaccaatttatttattgc
agtttgcttccacgtgagaaatatccagcatttcctgatgaccaagaccatgtggttgtt
gaaactgctctccgagtcaacagcaaaaacattatccaggccaatttcaccatctatgat
tgcaaaaggactggaaacatttacccaaagagagcgtgcaccagctgcctctcagccagg
tggaagtgtcattggtgcccctccacctacacctgcgtctccaaccactcgcagtgtgtc
agcgcgctgcagatgaagaagaaaattgactgtcctcgaattgtacctgcccctttggag
ccaatgcccacaggagtatctcgggacatcacgatctcactggccaatgcaactttctct
aaggagacagctctggagtgccattttgggacagacaggacatttgaagcccggtgggtg
aactcctccgctgtggagtgtgtacatgtgctgattgagcctctgcatgggccgctggag
gggggcacactgctgaccatccgtgggaggaacctgggccgccgcttcagcgacgtcctc
gctgctgtccgggtgggcagcgtgcactgcgccccgctgcccgacagatacgtcgtctct
gagatgatcgtgtgccagactggagaggctcaggaggcgttctcggatgtggtaacggtt
aatgtgagccgggaagggaagtccagggagcgatactcctatgtgcttcccctggtgcag
tccatagctcccccaaatggcccgaaggctggaggaaccagagtgaccatcagaggcagc
aggctggatgtcggctcggagctccgtgtcctcatcaactcctccaagcagtgcactgac
ctcagccgcaccgacagcaccatcacctgcaccatgcccgccgcggagctcaccacccct
gtgccagtctgcgtgcagtttgagaacaagtcttgtgccagcctcaacatcactttcaag
tatgagaagaacccggttatatcagacatcaaccccaaaaagagccagatcagtgggggc
aggatcatcaccctggagggaagaggctttgggctggtccagaacgtgtccatggctgtc
cgtggcatcggcagagaacacacgtgctgcaaggttcacactgacaccacgatcacctgc
ccctctccagctgcctccaacatcactgtggggagcaaacctgcccccgttgacttctac
ctcaatgggcgcctctacgcagatgaccgcccagctctggatgaggagatgtaccctgag
gaggccctgcacttcagcaagttcagcctggagtactatgctgacccgcagttctccaca
gccaagaaggagaagtggatcaagcaccatcccggcgagcccttaactctggtcatacac
aaagagcctgacagcctgggcctggagagcaatgagtaccaggtgaaaatcggcctgatc
tcatgtgagatccagattgtttcagacaaagtcatccactgctccatcaatgagtcgctg
agcacctcagaaaggcagttacccgtgacgatccaagttggaaagttcaactacacaatc
gcgatgctgcaccttgggggaggagagaccgcaatcattgtctccatcgtcatctgcagc
atcctgctggtcctttctgttgtagcactctttgtgttctgcacaaagagccgcagagct
gagcgctactggcagaaaaccctgctccagatggaggagatggagtcgcagatccgggag
gaaatccgcaaaggtttcgcggagctgcagacagacatgaccgacctgaccaaggagctg
aaccgcagccaagggatccccttcctggagtacaagcactttgtcaccaggacgttcttc
cccaaatgttcctctctctacgaggagtgctacgtcctcccgtcccagcagctcagctcc
caggtgggctcccaggtccaggaaacacatccgctcctggtgggggaatggaagatccct
gagaactgcagacccaacatggaagaaggaatctcactgttctccaccttactcaacaac
aagcactttctcatcgtgtttgtccatgctctcgagcaacagaaggactttgctgtcaga
gacaggtgtaacctggcgtccctgcttacgattgcgctgcatgggaaactggagtattac
actagcatcatgaaggacctcttggtagatctaatagatgcttcagcttccaaaaacccc
aagctgatgctgagaagaacggaatcggtggtggagaagatgctcaccaactggatgtcc
atctgcatgtacagctatctcagagagacagttggagagcccttcttcctgctgatctgt
gccatcaaacagcagattaacaaaggttctattgatgccattacgggaaaagccaggtac
accctcaacgaggagtggctgctgagggagaacattgaggcaaagccaaggaacctcaac
gtctccttccaaggctgtgggatggactccctgagcgtcagggccatggacacggacaca
ctcagccaagtgaaggagaagattctggaggccttctgcaagaatgtcccctactcccag
tggccaagggtggaagatgttgaccttgagtggtttgccaccagcaccgacagctacatc
ctgcgggaccttgatgacacctcggtggtggaggatggcaggaagaagctcaacacgtta
gcacattacaagatccccgaaggggcgtccctggccatgagtttgtcagacaagaaggac
accacactgagcagagtgaaggatttggacactgagaagtactttcacttggttctccca
actgatgaatcagtggaacataagaggtcccacaggcagagccataggaagaaagtcctt
ccagagatctacctgacacggctgctctccaccaagggcacactccagaagttcctggat
gacttgttcaaagccattctcagtatccgagatgataaaccgcctgtggccgtgaagtat
ttttttgacttcctagaggagcaagcagagaagagagggatcacagaccctgacactctg
cacatctggaagaccaacagcctaccactgaggttttgggtcaacatcctgaaaaacccc
cagttcgtcttcgacattgacaaaacagaccacatcgatgcctgtctgtctgtgatcgcc
caggccttcatcgacgcctgctctctctctgacctgcagctgggcaaggactccccgacc
aacaaactgctgtatgccaaggagatccccgagtacaggaagatagtgcagcgatactac
aagcaaatccacgacatgtccccgctgagtgagcaggagatgaacgcccacctcgcagag
gagtcgcggaaataccggaatgagttcaacaccaacgttgccatggccgagatatacaaa
tatgccaagagataccgctcacagatcgtggctgccctggatgccaaccccacaacgaag
cgcacccagctccagcacaaattcgaacaagtgattgcgctgatggaggataacatctac
gagtgctgcagtgaagcctag
DBGET
integrated database retrieval system
