Empidonax traillii (willow flycatcher): 114068935
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Entry
114068935 CDS
T05887
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etl04515
]
114068935
Cell adhesion molecules [BR:
etl04515
]
Cadherins
Protocadherins
114068935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
114068935
NCBI-ProteinID:
XP_027761207
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MGAASAERGPRRGGHRCPAGHPARMPRAGQARRSLGLPRVFSFCLFLHSSSAQIRYSIPE
ELTRGAFVGNIAKDLGTDVAKLAAANLQVLSDSDSQYFSVNVNTGVIMVSERIDREQLCG
QNPRCFLHLKLAIENPVEFYRIEVEILDINDNPPLFPSDEVSLRIYEMASLGARFPIQPA
QDPDVGTNTLQTYHLSANDNFNLNVKARTDGGKFPELVLERALDREFRAFHYLVLTAEDG
GSPPQSSKIRITIQVLDANDNHPVFDRPSYGARLVENSPLGTLVVKLNATDVDEGPNGDI
RYSLSSHNSAALRQIFAIDEQTGEIRVQGNLDFEEATVYEIEVEAKDMGSPTMEEHCSVV
VEITDVNDNAPEVILTSFSSSLSEDALPGTVVAVIHVRDRDSGEQGKVLCHVSPDLPFQL
RKDYEHQYSLLTSTRLDRELVAYYNVTVSASDLGNPPLSRHTILPITLTDVNDNAPQFEQ
ASYEVLVAENNPVGSVLVTVSAADPDSEQNSRLSYSILRAGGTDPGLDPTRYLSIHPTSG
QVTAKFPFDYEQTTYLQFHVEVSDGGSPALRNRTLVHVFIVDQNDNAPQVHFPKAGGESA
AQFRISPSIVPPALITKVVAIDADSGRNAWLSYHLVEATDLGLFSVALRSGEVRITRALQ
DTDASAHELLVVVRDAGEPPLSTAVTLVVLVEEKGPEALQGSEARAADGGGLPTITLYLI
VSLVLISTVSLVGLAALGVRCLRRGSAPANQGCCVESVNTLQPPPSHIFGHLHYEPKQGD
TVMGVQVTATAPPAPRYRSCFSPVSDISEFMFVKPSADPPKYSEQAQPNTDWRFSQTQRP
GTSGSQNGEEAGAWPNNQFDTEVLQAMILASANEAADGNSTLGGGNGTMGLSARYGPQFT
LQHVPDYRQNVYIPGSNATLTNAAGKRDAKNAAPAAGNKKKSGKKEKK
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgggagcggcgagcgctgagcgcggcccccggcgcggagggcatcgctgcccggccggc
cacccggcaaggatgccgagggcagggcaggcgcgccggtccctggggctgccgcgtgtc
ttctccttctgtttgttcttgcacagctcctccgctcagatccgatacagcatcccggag
gagctcacccggggtgcctttgtgggcaatatcgcgaaggacctgggcaccgatgtggcg
aagctggcggcagctaatctgcaggttctgtccgattcggattcccagtacttctctgtc
aacgtgaacactggtgttataatggtcagcgagcggatagaccgggagcagctctgcggg
cagaacccacgctgcttcctccacttgaaacttgccatcgagaacccagtggagttttac
cgcattgaggtggagatcctggatatcaatgacaaccccccgttgttccccagcgatgag
gtgtctctgcgcatctacgagatggcgtctctgggtgcccgcttccccatccagcctgcc
caggaccctgatgtgggcaccaacaccttgcagacctatcacctgagtgccaatgacaac
ttcaatctcaacgtgaaggcgcgcactgatggtgggaagttccctgagctggtgttggag
cgggccctggaccgggaattcagagctttccattacttggtcctgactgctgaagacggg
ggctctcccccacaatcaagcaagatacgcatcactatccaggtcctggatgccaatgac
aaccaccctgtctttgacagaccatcatatggagcccgcttggtggagaactcaccgctg
ggcaccctcgtggtaaagttaaacgccaccgatgtggatgaaggacccaacggagacatc
cgctactcactcagcagccacaactcggctgccttacgccagatcttcgccatcgatgag
caaactggggagattcgtgtccagggcaacctggacttcgaggaggcgacagtgtatgag
atcgaagtggaagccaaggacatggggtcgcccacaatggaggagcactgcagcgtggtg
gtggaaatcactgatgtgaatgacaatgcacccgaggtcattcttacctccttctccagc
tccctgagtgaggatgcgctgccgggcacagtggtggctgtgatacacgtcagagaccgg
gactctggggagcagggcaaggtcctgtgccacgtgtctccggatcttcccttccagctg
cgcaaggactacgagcaccagtactcgctgctaaccagcactcgtctggaccgggagctt
gttgcctactacaatgtcaccgtctctgcctcggacctgggcaatccccccctctcccgc
cacaccatcttgccaatcaccctgacagatgtcaatgacaacgctccccagtttgagcaa
gcatcctatgaagtgctggtggcagaaaacaacccagtgggcagtgtgctggttacggtc
tctgctgctgaccctgactcggagcagaattcccgcctctcctactccatcctgcgagct
ggtgggacagatccaggcctggatcctactcgctacctctccatacatcccacgagtggg
caggtcactgctaagttcccttttgactatgagcaaaccacctatctccagttccatgtg
gaggtctctgatggtggctccccggccttgaggaacagaactctggttcatgtttttata
gtggaccagaatgacaatgccccacaggtgcatttccccaaggccgggggggaatctgct
gctcagttccgaatttccccctccatcgtcccacctgctctcatcaccaaggtggtggca
atagatgcggactcggggcgcaatgcctggctatcctaccacctcgtggaagccacagac
ctggggcttttcagcgtggccctgcgttctggggaggtccgaatcacacgggctctgcag
gacacggatgcctctgcgcacgaactgctggtggtggtccgggacgccggggagccccca
ctctccacagctgtcacgctggtggtgctggtggaggagaagggtccagaggccctgcag
ggctccgaggctcgggctgctgacggtgggggattgcccactattacgctttacctgatt
gtatccctagtgctcatctccaccgtctcgctggtgggactggcggcgctgggcgtacgg
tgcctccggcggggctctgcacctgccaaccagggctgctgcgtggagagcgtgaacacg
cttcagccccctcccagccacatttttgggcacttgcactatgagcctaagcaaggggac
acggtgatgggcgtgcaggtgacagcaacagctccccccgccccgcgttaccgctcctgc
ttctcgccggtctcggatatcagcgagttcatgtttgtgaaaccctccgcggatcctccc
aagtacagcgagcaagctcagcccaacacagactggcgcttctctcagacccagagacct
ggaacaagtgggtcccagaatggagaggaagctggagcctggccaaacaaccagtttgac
acggaggtgctccaagccatgatcctggcttcagcaaacgaagctgctgatggcaactcg
accctgggcggcgggaatggcacgatggggctgagcgcccgctacggcccccagttcacc
ctgcagcacgtccccgactaccggcagaacgtttacatcccgggcagcaacgccaccctc
accaacgccgccggcaagcgcgacgccaagaacgccgcccccgccgcaggcaacaagaag
aaatccgggaagaaggaaaagaaatag
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