Empidonax traillii (willow flycatcher): 114072272
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Entry
114072272 CDS
T05887
Name
(RefSeq) LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DRB1-4 beta chain-like
KO
K06752
MHC class II antigen
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04145
Phagosome
etl04514
Cell adhesion molecules
etl04672
Intestinal immune network for IgA production
etl05164
Influenza A
etl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114072272
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114072272
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
114072272
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
114072272
05168 Herpes simplex virus 1 infection
114072272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
etl04147
]
114072272
Exosome [BR:
etl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114072272
Exosomal proteins of epithelial cells
114072272
Exosomal proteins of breast milk
114072272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MHC_I
MHC_II_beta
C1-set
ig
MHC_I_3
C2-set_2
Motif
Other DBs
NCBI-GeneID:
114072272
NCBI-ProteinID:
XP_027765988
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MTPLDLPNLCVPPVLHSLHYLNVAVMEPSLGIPQFMDLGYLDGIPITRYDSERHWEKPLT
PWMAAGTEPEYWEEETQISERNRIVAAASLERVGARYNWSGGLHTWQWLSGCDLLSNGSV
RRTLRLGYDGRDFISFSPESGTFVAADGAAQITQRKWRSEGYKDLQQDLGLRCAEWLQKY
VGYGWEALEHKGEGDRIPMGMWDLGMWDLGGCQRFAKSCWNVFPVSAPIPSIRVPQDGVG
TELQALGSGRVFQELSTSECYFMNGTERVRFVERYIYNRQQYVHFDSDVGVFVGDNPRGD
ILARYGNSQQEFLEYKRSAVDWFCRKCYQIATPFLVNRRAQPSVSPVSPSAPQRVHLAGA
VKLPARPQPLLCSVMDFYPAXVQVRWFQDGQELPEHVLATDVVPNGDWTYQVLVMLEIPP
RRGVTYTCQVEHVSLEHPLSRHWEMPQDIVRTKILVGVGGFVLGFVFLALGLGFYLREKS
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgacccccctggacctcccaaatctctgtgtccccccagttctccactccctgcattac
ttgaacgtggcagtgatggagcccagcctggggatccctcaattcatggatttgggatac
ctggacgggatccccatcacgcgctacgacagtgagcggcactgggagaagccgctgacg
ccgtggatggcagctggaactgagccagaatattgggaggaggagacccagatcagcgag
aggaaccggatcgtggctgctgccagcctggagagagtgggggcccggtacaactggagt
gggggtctccacacgtggcagtggctttctggctgtgacctcctgtccaacgggagcgtc
cgcagaacccttcgacttggctatgacgggcgggatttcatctccttctccccggagagc
gggaccttcgtggcggccgatggagctgcccagatcacccagaggaaatggagatctgaa
gggtacaaggatcttcaacaagacctgggactgagatgtgcggaatggctccagaaatat
gttggatatgggtgggaagcgctggagcacaaaggtgagggagacagaattcccatggga
atgtgggacttgggaatgtgggatttgggagggtgtcagaggtttgcaaagagctgctgg
aatgttttcccagtgtcagcccccattccctccatccgtgtgccccaggatggggtgggg
acggagctgcaggcgctgggcagcggcagggtgttccaggagttgtctaccagcgagtgt
tacttcatgaatggcaccgagcgggtgaggttcgtggagaggtacatctacaaccggcag
cagtacgtgcacttcgacagcgacgtgggggtctttgtgggggacaacccgcgtggggac
atcctggccaggtacgggaacagccaacaggagtttctggagtacaaacggtctgcggtg
gactggttctgccggaaatgctaccagatcgccaccccgttccttgtgaaccgcagagct
cagcccagtgtctcccccgtctctcccagtgccccccagcgtgtccatcttgctggtgcc
gtcaagctcccagcccggccccagcccctgctctgctccgtgatggatttctaccctgcc
ncggtgcaggtgaggtggttccaggatgggcaggagctgccggagcacgtgttggccacc
gacgtggtccccaacggggactggacctaccaggtgctggtgatgctggaaatccccccc
cggcgcggggtcacctacacctgccaggtggagcacgtcagcctggagcaccccctcagc
cggcactgggagatgccacaggacattgtccgtaccaagatcctggtgggggtcgggggc
ttcgtgttgggtttcgtcttcctggcgctggggctcggcttctacctgcgggagaagagc
tcctga
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