Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_1924
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Entry
ECUMN_1924 CDS
T00831
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Pathway
eum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECUMN_1924 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eum03400
]
ECUMN_1924 (nth)
Enzymes [BR:
eum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ECUMN_1924 (nth)
DNA repair and recombination proteins [BR:
eum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ECUMN_1924 (nth)
Prokaryotic type
ECUMN_1924 (nth)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
P_gingi_FimA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAR13121
UniProt:
B7NB87
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All DBs
Position
1946302..1946937
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AA seq
211 aa
AA seq
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MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PTAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYKEKVNI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcaaaacgcctggagatcctcactcgcctgcgtgagaacaatcctcatccc
accaccgagcttaatttcagttcgccttttgaattgctgattgccgtactgctttccgct
caggcgaccgatgtcagtgttaataaggcgacggcgaaactctacccggtggctaatacg
cctacagcgatgcttgaactgggcgttgaaggggtgaaaacctatatcaaaactattggc
ctttataacagcaaagcagaaaatatcatcaaaacctgccgtatcttactggaacagcat
aatggcgaggttccggaagatcgtgctgcgcttgaagccctgcctggtgtaggtcgtaaa
acagccaacgtcgtattaaacactgcattcggctggccgactattgctgtcgacacgcac
attttccgcgtttgtaatcgtactcaatttgcgccggggaaaaatgtcgaacaggtagaa
gaaaagctactgaaagtggttccggcagagtttaaagtcgactgccaccattggttgatc
ctccacgggcgatatacctgtattgcccgcaagccccgctgtggctcttgtattattgaa
gatctttgtgaatacaaagagaaagttaacatctga
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