Escherichia coli UMNK88 (ETEC, porcine): UMNK88_4024
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Entry
UMNK88_4024 CDS
T02001
Name
(GenBank) conserved hypothetical protein
KO
K18140
TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Module
eun_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eun03000
]
UMNK88_4024
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
eun01504
]
UMNK88_4024
Transcription factors [BR:
eun03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
UMNK88_4024
Antimicrobial resistance genes [BR:
eun01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
UMNK88_4024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_2
TetR_N
TetR_C_4
GntR
TetR_C_5-like
Motif
Other DBs
NCBI-ProteinID:
AEE58553
LinkDB
All DBs
Position
complement(3900179..3900841)
Genome browser
AA seq
220 aa
AA seq
DB search
MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVTRGAIYWHFENKTQLFN
EMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAKIPRQQALLKILYHKCEFN
DEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLDVVMIIIDGAFSGIVQNWLMN
MAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELSVM
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagaaccaaagccgaagctctgaagacccggcaagaactgattgaaactgcc
atcgcccagtttgcgcaacatggcgtaagcaagacgacgctcaacgacattgccgatgcc
gctaacgttacgcgtggcgctatctactggcacttcgagaacaagacccaactgtttaat
gagatgtggttgcaacagccttcattgcgggagttaatccaggaacacttgacggctgga
ttagagcatgacccgtttcaacaattgcgtgaaaaattgattgtcggcttgcaatatatt
gccaaaattccccgccagcaggcgttgctgaaaatcttatatcacaaatgtgaatttaat
gatgagatgctggccgagggagtgatacgcgaaaagatgggctttaatccgcagactctc
cgcgaagtattgcaggcgtgtcagcaacaaggttgtgtagcaaataacctcgatttagat
gttgtgatgattattattgatggtgccttcagcggaattgttcaaaactggttaatgaat
atggcgggttatgatctttataaacaagcacccgcgctggtcgataacgtattaagaatg
ttcatgccagatgaaaacataacgaaattaattcatcaaacgaatgaattaagtgtcatg
taa
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