Eutrema salsugineum (saltwater cress): EUTSA_v10001974mg
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Entry
EUTSA_v10001974mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K16189
phytochrome-interacting factor
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
EUTSA_v10001974mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eus03000
]
EUTSA_v10001974mg
Transcription factors [BR:
eus03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
EUTSA_v10001974mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
SprA-related
Motif
Other DBs
NCBI-GeneID:
18025714
NCBI-ProteinID:
XP_006408930
UniProt:
V4MD07
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MSHFVPDFDTDDDYANVNPNSSSSSSLNLPRKPIMGEEDDLMELLWQNGQVVIQNQRLNN
ANKKPPSSSVKLHGGGVAPPPPPPTHQPLDENLFIQEDEMASWLHYPLREDDFCSDLLFS
AQPTAPATTAPRPPVPSARPPVRNFTNFSRLRGNFTGRGESGSKAIVRESTQVNPSATPS
SAAAASESGLTRRTDGIDGRGTVNFGSSSAVACNFAKGKEVATTTTATATATATASEIPG
ASSSVASKSENEAVIVQQETANTTVDERKRKEREAIDDSEETKQGRGSTTSTKRSRAAQV
HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMP
MMYTGMQHYMPHMAMGMEMGMNRPPPPFMPFPNMVAAQRPLPTQTHMSSYSVHASDPSRV
LYQHFDPTSSSHPGYMDPYQQFHHIQPPQFQNQATSYPSSSRVSSSKESEDQGNHTTG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatttcgttcccgacttcgataccgatgatgattatgccaacgttaaccctaat
tcctcttcatcttcctctttgaatcttcccagaaaacccattatgggtgaagaagatgac
ctcatggagcttctatggcaaaacggtcaagtggttatccaaaatcagagactcaacaac
gccaacaagaaacctccttcttcttctgtgaagcttcacggcggcggagttgctcctcct
ccgccgcctccgacgcatcagccgttagatgagaatctctttatccaggaagacgagatg
gcgtcttggcttcactatcctctccgtgaagatgatttctgctcagatcttctcttctcc
gcccaaccaactgctccggcgaccaccgcaccgagaccgccggttccgtccgccaggccg
ccggtacgcaatttcacgaatttctcgaggctcagagggaattttaccggcagaggtgaa
tctggatccaaagcgatcgtgagagaatcgacgcaggtaaaccctagcgccacaccgtct
tcggcggcggcggcgagcgaatccggtctaacacggcgtacagacggcattgacggtcga
gggacggttaatttcggatccagctccgccgtggcgtgcaatttcgccaagggaaaggaa
gtggccacgacgacgaccgcgacggcgacggcgacggcgacggcgagtgagattcccggt
gcatcgtcttctgttgcgtcaaagagcgaaaacgaggcggtgattgttcaacaggagacg
gcgaacacgaccgtcgatgagaggaaacgaaaggagagagaagccattgacgacagcgag
gaaacaaaacaaggacgtggatcaacaacatctaccaagagatctcgagctgcacaagtt
cataatctctctgaaaggaaacggagagataggatcaacgagaggatgaaagctctgcaa
gaactcattcctcgctgcaacaagtcagataaagcttcaatgctcgatgaagctattgag
tacatgaaatcgctccagcttcaaatacagatgatgtcaatgggatgcggtatgatgcca
atgatgtataccggtatgcaacactacatgcctcacatggcgatgggcatggagatgggt
atgaaccggcctcctcctccgtttatgccattccccaatatggtagccgctcaaagacct
ttgcctacacagactcatatgagcagctactctgttcatgcttctgacccatcaagagtc
ttataccagcactttgatccaacatcatcgagccatcctggttacatggatccttatcag
cagttccaccatatccaaccaccacagtttcagaatcaagccacatcgtacccaagttca
agcagggtcagtagtagcaaggaatctgaggatcagggaaaccatacaacaggttga
DBGET
integrated database retrieval system