Eutrema salsugineum (saltwater cress): EUTSA_v10003513mg
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Entry
EUTSA_v10003513mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10003513mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10003513mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
EUTSA_v10003513mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
EUTSA_v10003513mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
DUF7307
Motif
Other DBs
NCBI-GeneID:
18011659
NCBI-ProteinID:
XP_006394681
UniProt:
V4KPT0
LinkDB
All DBs
Position
Unknown
AA seq
1583 aa
AA seq
DB search
MSSKRSLKRVLDLGDDDEEKDKFYKLKVLLPNSTNVTLELTNTESEMSMKNFVNQVKEVS
EKTRKNCVLSGKKRKQVDWERAAKSFLEFNGEKIKGTVRFEMFKPDWCNILRLDDGSGSG
EASIMYENMWDLTPDTDLLKELPQNYSFDTALADLIDNSLQAVWSCSTGERRLISVDVLA
DRISVFDSGPGMDSSEENSIAKWGKIGASIHRSHKSKAIGGKPPYLMPFFGMFGYGGAYA
CMHLGRRTLVSSKTKQSKKVFTLQLNKENLIGNRSNSGKNWKVDGGMRDPLDDEITLSPH
GSFTKVEIFEPKGRIPEIDQLRCKLKDIYFPYIQCDEISKTGKTLTPVEFRVNGKDLAGV
IGGEVATTNLNSSKGDEFWFQIRFVDKRKGSTSQEANARLKFLYFPIINGKESINTILET
LEKDGNKVSQSFETFGRVSVRRLGRLLPEVPWKSIPFMERGARASTLQKCCQRVKCFVDL
DAGFSPSPSKTDLASQNLFTLVLKNFGSKLKEKDTDVSIVIHKGGKCMNYVQLEQSFQAW
VLDMHKSYDEEHASGEDDAIVICDSLDNKALGISLDCKAVRVHNVMKRKGMSWERGQKIK
ILKGACTGAHKNDVYATIDYFLIENFEDETGGDARIICRQINFSESEGCELSIIKGISRL
EIRKSSSFPISIIDSGNCVHLDETEWNKKLERQKEKDPSRIDLLDDRDCSALNLNGESTL
ADTMCAGQTPPQQIVAVVRPGCFTSSKMSKKLDQKQIVKMDGEMVVEVEYIQDCNMKSKE
KNAEPLYTDCSFPTSRGGFHGLYIFPLESKFPTMFKKAGTYNFSFSVGNSITCKKKVVVK
SSSKVGSWKLASNQETINVRVGSSLPPCSIACLDEYENHIPFTCVPSLEVKLKASQGFEV
PIEKIDASLIDRGILKVKNMLVETDGLDQIRPDYKATLEICSKDEPFSVSVACKVNPGPL
KRVVENNSQALENLLPGSTVEDYILQMLDGYNNHVAEGTNVKICIDGYSIQDSNSMGLNR
KVDSHGCIDLSGILKVTAGYGKSVSLAVMSGKKEIFKKESLIEKRELVLLTKLPEYCTAG
SNLTNLIFKVTESDGSLDTSIHDDEKSGCSHTMSIESESSSVESGVRYAFLHGTCKIPSL
SLPETEGAFSFKVFHSRYPELHMILKIQLTSPQTFEIDEAGCSTPYPRICLTPQSKMGST
TNPLVTPTQETPSSQCRVLAMRTVSSLALSSQTSPMDMEQYTGMLKANLSSYIERRAETY
ERLKCLEVEKEHAEQELRTLQASLEHLSAAFPECLSTKEIIMKKIEEMHQDTAASVFCSL
YRNAPSPRSLFLSKKGVFGLVVTLATVDSTSLSRVLSEYLGEDTMLALVCRSSRFVPNSA
EYLRLQTEAARLGRSISNRFLVLCLDAIRPWIDGLVENDPQRKLAMDDPKLPDGEPIPGF
KGYAVNLIDLAPEDLHIKTYAGHGLRETLYYGLFGNLQVYETQAHVVEALPHIHGGGAVS
LDGFIAKGNGFLYSGCSKTEIHFPITVTENEGEKLRQLEAAKDRLRMVEEKILEDRFSLC
KLEKKLKETNETFDNTTKISFED
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcaagagatcgctcaagagagtattggatctaggcgatgatgatgaagaaaaa
gataagttttacaagctcaaggttctgttaccaaacagcacaaatgtgacactcgaactc
actaacacagaatccgaaatgtcaatgaagaatttcgttaaccaggtgaaagaagtgtct
gaaaaaactaggaaaaattgtgtcttgtctggtaagaagaggaaacaggttgattgggag
agggctgctaagtcttttctcgagtttaacggtgaaaagattaaaggaaccgttcgattt
gagatgtttaagcctgactggtgtaatatactacgtcttgatgatgggtctggttctgga
gaagcttccattatgtatgagaatatgtgggacttaacacccgacactgatctgcttaaa
gaactacctcaaaattatagcttcgacacagctcttgcggatcttattgataattcattg
caagctgtgtggtcttgctccacgggagaacgaagactgattagcgtggatgttctcgca
gatcgtatttcagtctttgattctggtcctggaatggacagtagcgaggaaaactctatt
gctaaatgggggaaaataggggcgtccatacatagatctcataaatccaaagctattgga
gggaaacctccatatcttatgcctttctttgggatgtttggatatggaggtgcttatgct
tgtatgcatttgggaaggcgtactttggtgtcttcaaagactaaacagtcaaagaaagta
ttcaccttgcaactcaataaagaaaatttgattggcaatcgttctaactcaggaaaaaac
tggaaggtggatggtggaatgagggatcctttagatgacgaaattacgttatctcctcat
ggaagcttcacaaaggttgagatatttgaacccaaaggtagaatcccagaaatagatcaa
cttcggtgcaaacttaaggatatttattttccttacatccagtgtgatgaaatctccaaa
acggggaagactttaacgcctgtagagtttcgggtcaatggaaaagatttagctggggta
attggtggagaggttgccaccaccaacctaaactcctccaagggtgatgaattttggttt
cagattcgatttgttgacaaaagaaaagggagtacatcacaagaggcaaacgctcgactc
aagtttctttattttccaatcatcaacggtaaggagagcattaatacaattttggaaacc
ttagagaaggatgggaacaaagtttctcaaagctttgaaacgtttggtcgtgtttctgta
cgaaggctcggtcgtttactcccagaagtcccttggaaatcaattccgtttatggaaaga
ggagccagagcctcgaccttacagaaatgttgccaaagggtgaaatgctttgttgatttg
gatgcggggtttagcccatcgccttcaaaaactgaccttgcaagccaaaacctattcact
ctggttctgaaaaattttggtagtaaattgaaagagaaggatacagatgtcagtatcgtg
attcataaaggaggaaaatgcatgaattacgtgcaactggaacagagttttcaggcttgg
gttcttgatatgcataagtcttatgatgaagaacatgcatcaggtgaagatgacgcaatt
gttatatgtgattctttggataacaaagctcttggcatttcgcttgattgtaaagctgtg
agggtgcacaatgtaatgaagagaaaagggatgtcatgggaacgtggacagaagatcaag
attctcaaaggagcatgtacaggagctcacaagaacgatgtctatgcgactattgactat
ttccttatagaaaatttcgaggacgaaactggcggtgatgcccggattatatgcaggcaa
atcaatttctctgagtctgagggatgcgagctttcaatcattaaaggaatttcaagactg
gaaattagaaagtcttcatctttcccaatcagtattatagactctggaaattgtgtacat
ctggatgaaaccgaatggaataaaaaactcgaaaggcaaaaggaaaaagatccatccaga
atcgatttgctagacgacagagattgctctgcattgaaccttaatggggagtcaacactt
gctgatacaatgtgtgccggacaaactcctccgcaacagattgttgcagttgttagacct
ggttgcttcacatcttcaaagatgtcgaaaaagttggatcagaagcaaattgtgaagatg
gatggagagatggtcgtggaagtggaatatatacaagactgcaatatgaaatcaaaggaa
aagaatgcagaacctttgtatacggattgttcttttcctacatcacgtggagggtttcat
ggtctttacatatttccacttgagtccaagttcccaaccatgttcaagaaagctgggact
tacaatttttcattctctgttggaaattcaattacttgtaagaaaaaggtggttgtcaaa
tcatcttcgaaggtgggaagttggaaacttgctagtaaccaggagaccattaatgtccgt
gtgggatcgtctcttcctccttgctctatcgcttgcttggatgagtatgagaatcatata
ccattcacttgtgttccaagtctggaagttaaactaaaagccagccagggattcgaagtc
cccattgaaaagattgacgccagcctgattgaccgtggaattctcaaagtcaagaatatg
ctcgtggagactgatggtttagatcagatcagaccagattataaagcaaccttagagata
tgctcaaaggacgaaccattttctgtctcggttgcttgtaaagttaatcctgggcctctg
aagcgtgttgtcgagaataattcacaggctttggaaaatttgcttccaggttctactgtt
gaagattatatcttgcagatgttagatggatataataaccatgttgcagaaggtaccaat
gttaagatttgtattgatggctattctatccaagactcgaactcgatgggcttaaaccga
aaggttgatagtcatggctgcattgatctgtctggaattctcaaagtcacagcaggctat
ggaaaatctgtttcactcgctgttatgtctggcaaaaaagagatcttcaagaaagagtct
cttattgagaaaagagagctcgtgctcttaacaaagctgcccgagtactgtactgctggt
tcaaatcttacaaacctcattttcaaagttacggaatcagatggttctttggatacaagt
attcatgatgacgaaaaatccggatgttcccacacaatgagcattgaatccgagtcaagc
agcgttgagagtggagtcagatatgcctttctccatggtacctgcaaaattccttctctc
tctctgcctgagacagagggtgccttctccttcaaggttttccattctaggtatcccgag
cttcatatgatcttaaagattcagttaacttctcctcaaacatttgaaattgatgaagct
gggtgttcaacaccttatccaaggatttgccttacacctcaatcaaagatgggttcaacc
acaaatccattggtgactccaactcaagagactccaagctcacagtgtagagttttggcc
atgaggacagtgtcatcattggctctcagtagccaaactagcccaatggatatggaacag
tacactgggatgctaaaagcaaatctcagtagttacatcgaacgcagagcggaaacatat
gagcgtctaaaatgtttggaagttgaaaaagaacatgctgagcaagagttgcgtaccttg
caagcttctctggaacatctcagtgctgcgttcccagaatgcttatcgaccaaagaaata
atcatgaaaaagatcgaagagatgcatcaagacactgctgcatcggttttctgttctttg
taccgaaatgctccgtctccgaggtctctgtttttgtcgaagaaaggagtgtttggcctg
gtcgtgacgcttgctacagttgactccacttcccttagcagggtattgtctgagtatttg
ggagaagacacaatgctagctttggtatgcagatcgtcacgatttgtacctaatagtgct
gagtatctcaggcttcaaactgaagcagctaggctcggaagatcgataagcaatcggttt
cttgttctatgtcttgatgcaatcagaccttggattgatggacttgtggagaacgatcct
cagaggaaattagccatggatgatccaaagctgcccgatggggaacctataccgggtttc
aaaggctatgcagtgaatttgattgatctagctcctgaggacttgcacataaaaacatat
gcgggtcacgggcttagagagactctgtattatggtctctttgggaatttacaagtttac
gagacccaagcacatgttgtagaagctcttccacacattcatggtggtggtgcagtatct
ttagatggttttatcgcaaaaggaaacggatttctttattctgggtgcagcaaaacggaa
attcatttcccgataacagtaacggaaaatgaaggagagaagctgagacaactagaagca
gcaaaagacagactgagaatggtggaagagaagatactggaggacaggttttctttgtgt
aagttagagaagaaattgaaggagactaatgaaacatttgacaatacaacaaaaatttct
tttgaggactaa
DBGET
integrated database retrieval system