Eutrema salsugineum (saltwater cress): EUTSA_v10014095mg
Help
Entry
EUTSA_v10014095mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EUTSA_v10014095mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10014095mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
EUTSA_v10014095mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
Arf
AAA_15
AAA_23
ORC-CDC6-like
nSTAND3
AAA
Zeta_toxin
AAA_30
AAA_25
AAA_7
Motif
Other DBs
NCBI-GeneID:
18018342
NCBI-ProteinID:
XP_006398691
UniProt:
V4L927
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MAVTEEEKRSSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSLKLNASDRCLLVGSNGAGK
TTILKILGGKHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMD
ISAEKMIFGVAGIDPQRRAELIKVLDIDVSWRLHKVSDGQRRRVQICMGLLKPFKVLLLD
EITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLAMPM
EKVKETSKKSLMRTVESWLRKERDEERKTRKERKANGLPEFESRAEESRVTGDPARMLNN
GWAAGRLHSTIAGGEDNFVFSSNRVLR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacggaagaggagaagcggagttcaacggttgagatctccggattacgtttc
acgtatcctggaatcgacggccatccacctccaggatctaaaccacttatcgaagatttc
tctctgaagctcaatgcaagcgatcggtgtctcctcgtcggatctaatggcgcagggaaa
acgacgattctgaagatattgggagggaaacacatggtggagccgcacatggttagggtt
ctgggtcgatcggcgtttcacgacaccggattgacatcttctggtgacctttgttatctc
ggtggcgagtggaggcgtgatgtcgcatttgcaggatttgaagttccgatacaaatggac
atttcggcagagaaaatgatatttggagtggcgggtattgatcctcagagaagagctgaa
ctgatcaaggtgttggatatcgatgtctcttggagattgcacaaggtatctgatggtcaa
agaagacgtgtccagatttgtatgggactcctcaagcctttcaaggttctactattggat
gaaataactgttgatcttgacgttctcgctagagccgaccttttgaaattcctgagaaag
gaatgcgaagaacgaggagcaaccataatctatgcgacccatatattcgatggcctagaa
gattggccaacacacattgtttatgtagcaaacgggaagttgcagctagcaatgccaatg
gagaaagtgaaggagacaagcaagaagtcattgatgagaacagttgagagttggctgagg
aaagaaagagatgaagagaggaagacaaggaaagagaggaaagcaaatgggcttcccgag
tttgaatcacgggctgaagaaagccgtgtgaccggtgatccagcgaggatgctgaacaat
ggctgggccgctgggagacttcactctacaattgcaggcggtgaggataatttcgttttt
agctcaaacagagttctcagataa
DBGET
integrated database retrieval system
