Eutrema salsugineum (saltwater cress): EUTSA_v10022535mg
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Entry
EUTSA_v10022535mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13141
integrator complex subunit 4
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10022535mg
Spliceosome [BR:
eus03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
EUTSA_v10022535mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_2
mTOR_dom
Ssl1
Motif
Other DBs
NCBI-GeneID:
18025825
NCBI-ProteinID:
XP_006409431
UniProt:
V4M3T5
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MAMEEVDSISVESLSLRTLASIRSLIINIDTPDFVISSVFDFLTSFLSRDDPAILRHVLK
LLSDLSFGRKELAKQIFDSVLSNLLRLQNSTTNASHGRVALESLALLASISEMNPSIATK
ISKIDGEVFASICLGAPISYRMWLLRNVERFNVPLSVLFTLFLGFTKDPYPYIRKVALDG
LVYICNAGDFDHASAVQGCYTRAVELLGDDEDSVRSSAVRAVSTWGKVLITSKVEMNRRE
CTDGVFLQLCSIVRDMSVDVRVEVFKGFGIIGAASESIILQTLSKKVLGAEKGKKPQNCL
STESADVAAAAGVFIHGFEDEFYEVREAAVDSFHSLSVNSIKFPDEAVYLVMDMLYDDYM
VVRLKALEALHHIADLGNLKIQETYMPAFLDAIVDSSENIRVTARNILKLAKLPDLKLVT
KCVDGVLKSLEIYPQDEPDILSALFHFGQNHTNFLVSMIKKFFEKLEAASVNKSGLISRQ
VSASLMLIISVPLSDKLSVTSIPSLAFSYSLAMLGKFLCALHEMMDQDMLLAYLTHCSIL
SASSGTEFSKGDNFFHAYRHNNADLSGNPVLIPSKDIHAESKHMASKAVLENRKQAMKSV
DYILLKIKAAWFLSQSGCSKEAVRALRACKQELQTANFSISSGALEFMCQYVHVIELLVQ
VWRHFEYSRHSRTCKSVELELLIEEVEIKVMEIRCRFTGLSTEVSLVMELVIFGCLLRLY
KSEICCRLRCKKKLSSTVSQLQLHHEQQCTKPSDFLTETKKSLQEIGSYAEISCYRLFDL
VKKYNCFSPEQFILSGNLQCVSAELEVPGNGPYSPISFVAGLPVAIPCEIMLLNVPRDTC
MWLKISRSDESCQFVYLDPNLYNGDEREKRFMFSAVTYMNPRASVFTLRVSIGIECSFED
VCYRKWHHGPKHPVAYLCKERKVHITLVSKA
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaggaagttgactcgatttccgttgaatcactctctctccgcactctggct
tctattaggtcactcattatcaatattgacacccccgactttgtaatttcctcagtgttc
gactttcttactagttttctcagccgagacgacccggcaattcttcgtcacgtcctcaag
ctactctccgacctttcctttggtagaaaggaattagcaaaacagatctttgactcggtc
ctctccaacttgctccgccttcaaaactccacaaccaatgcgagccacggacgcgtcgcc
ctggaatcgcttgctcttctggcgtcgatatccgagatgaaccctagcattgccaccaag
atttccaaaatcgacggcgaggtatttgcgtccatctgcctcggagcacctatatcttat
cgaatgtggctacttaggaacgtggagaggttcaatgtccctttgtccgtacttttcaca
ttgtttttagggtttaccaaggatccgtatccttatatcagaaaagtagctctggatgga
ctggtttatatatgtaacgctggtgatttcgatcacgcctctgccgtacaaggttgctat
actcgtgctgttgagcttctaggcgatgatgaagatagcgtcagatcttctgcagttcgt
gccgtcagtacgtggggcaaagtgttgataacatccaaggtagagatgaacagaagagag
tgtacagatggtgtgtttcttcagctttgttctattgtgagagatatgagtgtagacgtg
agggtagaggtcttcaagggatttgggataataggggctgcatcagaaagcattatattg
caaacactttctaaaaaagtattgggagccgaaaaagggaagaaacctcagaattgtctt
tcgactgaatcagctgatgtcgctgctgcagctggagttttcatccatggttttgaagat
gagttctacgaggtacgagaagctgcggttgactcattccactccctctcagtaaattct
atcaaattcccagatgaagctgtatacctagtgatggatatgctatacgatgattacatg
gttgtcaggttgaaagctttagaggcattgcatcatatagctgacttggggaatttgaag
atacaggaaacttatatgcccgcttttttggatgctattgttgatagttctgagaacata
agagttacggctagaaacattcttaaattggcaaagctgcctgatctgaagctggtcacc
aaatgtgttgatggtgtcctaaaaagtttagagatatatccacaggacgaacctgatatc
ctgtctgctcttttccatttcggacaaaaccacacaaatttcttagtcagtatgatcaag
aaattttttgagaagttagaggcagcttctgtaaacaaatctggattaatcagccgacag
gtatcagcgtctctgatgctgataatctcagtccctctctcagacaaactaagcgtgact
tccataccatctctggctttttcatattcacttgcaatgctggggaaattcttatgtgca
cttcacgagatgatggaccaggatatgcttttggcttacttgactcattgcagtattctt
tctgcttcttcggggacagaattcagcaagggagataatttttttcatgcatataggcac
aacaatgcagatcttagcggaaatcccgtcctcataccaagcaaagatatacatgctgag
agcaaacacatggcttccaaagcagtactggaaaatagaaaacaggcaatgaagtctgtt
gattatatactgttaaaaataaaggcggcctggttcttgtcacaatcaggatgctcaaaa
gaagcagttcgagcgttaagggcttgcaaacaggaattgcaaacagccaatttttcaatc
tccagtggtgcattagaatttatgtgtcagtatgttcacgtaattgaacttctcgttcag
gtgtggcgtcatttcgaatactcaagacactccagaacgtgtaaatctgtagaactagaa
ctgttgatagaagaagttgagataaaagtgatggagataaggtgtagattcacaggcctt
tctacggaggtgtcactagtaatggagttagtaatttttggttgcttgttaaggctatat
aaatctgagatatgttgccgccttagatgcaagaagaaactatcttcaacagtatctcaa
ttacagctccaccatgaacaacaatgcaccaaaccatcagattttttaactgaaactaag
aagtcattgcaagaaattgggagctatgcagagataagttgctatagactgtttgatctc
gtcaagaaatacaattgtttctctcccgaacagtttattttatctggtaatttgcagtgt
gtcagtgcagagctcgaggttcctggtaatggtccttacagtccgatttcctttgtggct
gggctaccagtggctataccgtgcgagatcatgctacttaatgtgccgagagatacctgt
atgtggctcaaaatatccagaagcgatgaaagttgccagtttgtgtacttggacccaaac
ctttacaatggagatgagagagagaagaggttcatgtttagtgcagtaacttacatgaac
ccgagggctagtgtgttcacattgcgggtctcaataggtatagagtgttcgtttgaagat
gtttgttacagaaaatggcatcatggtccgaagcatccagtggcttatctgtgtaaggaa
agaaaagttcacattacccttgtttcaaaagcttaa
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