Eutrema salsugineum (saltwater cress): EUTSA_v10023214mg Help Entry EUTSA_v10023214mg CDS       T02985                                  Name (RefSeq) hypothetical protein   KO K16250   DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] Organism eus  Eutrema salsugineum (saltwater cress) Pathway eus03020   RNA polymerase Brite KEGG Orthology (KO) [BR:eus00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     EUTSA_v10023214mg  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:eus03021]     EUTSA_v10023214mg Enzymes [BR:eus01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      EUTSA_v10023214mg Transcription machinery [BR:eus03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Pol IV and V specific subunits      EUTSA_v10023214mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNA_pol_Rpb1_1 RNA_pol_Rpb1_7 Motif Other DBs NCBI-GeneID:  18010270 NCBI-ProteinID:  XP_006391790 UniProt:  V4MCZ2 LinkDB All DBs Position Unknown AA seq 1465 aa AA seqDB search MEEDSEELQVPIATLKSIGFSISKDEDRVKMAAFMEVEAPNQVSDSRLGLPNPDGICRAC GSKDRKTCEGHFGVIKFQYSVINPYFLKEIAALLNRFCPGCKNIRKKQSQSIEDRIERCR YCTSNTGYPLMKFRVTTKEVFRRSGIVCEVSEDNLLKLKKRGVLTLPRDYWDFVRKDSNI DESSLKPARRILTHAQVYGLLCGIDERLIRKDIPMFDSLSLTSIPVPPNGYRITELVNQF TGPKLIFDERTRIYKKLVGFEGNLLELSSRVIECMQYSRLFSENVSSSQESANPYQKKSD TPKLCGLRFMKDVLLGKRSDHTFRTVVVGDPSLKLNEIGIPRRIAERLQVTENLNNWNRE RLVTSCFHKLLLEKGEVYVRRGDSLVAIREIDDLQTGDNIFRTLRDGDTVLMNRPPSIHQ HSLVAMSVRVLPTTSVVSLNPIICLPFRGDFDGDCLHGYVPQSVQAKVELDELVALDKQF VNRQNGRNLLSLGQDSLTAAYLVNVEKNCFLNRAQIQQLQMYCPFQLPPPAIIRASSSSL SSREEPQWTGMQLFGMLFPPGFDYSYPLNNVVVSNGELLSSSEGSAWLRDGEGNFIQGLL KHDKGKVLDIIYSAQEMLSEWLLMRGLSVSLADLYFSSDSQSRRNLTDEITYGLQEAEQV CNKQQLMVESRRGFLAVNGEEEEEEDLTADLARFCVERQRSATLSKLAVSAFKDAYRDVQ ALAYRYGDQSNSFLIMSKAGSKGNIGKLVQHSMCIGLQNSSVALSFGFPRKLTCAAWNDP TSPLRGAKGEDKTASESFVPYGVIENSFLTGLNPLESFVHSVTSRDSSFSGNADLPGTLS RKLMFFMRDIYAAYDGTVRNSFGNHLVQFSYETDSPVEEIAGEAVGSLSACALTEAAYSA LDQPISLLETSPLLNLKNVLECGSKKGQREQTMSLYLSETLSKKKHGFEYGSLDIKNHLE KLSFSEIVSTSMIIFSPRKFTRIPLSPWVLHFHISKKAMKQKQLNAESVVSSLNKQYTSR KNELKLDLTDLQIQSTNHCSWDDKAMDDDRFCITVTVVEASHFSSLELDAIRLVLIPFLL DSPVKGYREIKRVDILWADRPKAPKRNVNSLPGELFLKVTMYGDGGKKNFWSALLETCLP VMDVIDWTRSHPDNIRQCCSVYGIDAGRSIFLANLESAVSDTGKTILREHLLLVADCLSV TGEFVALNSKGWGKQRQVESTPAPFTQACFSSPSQCFLKAAKEGVRDELQGSIDALAWGK VPCFGTGDQFEIIISPKNHGFSTPVDVFDFLSSTATLPKTGKVRATNSMPKSDKVTVQPF PLLDNAISKAINTLDGKGLAMSQLRNILTWDGIEKLSRSLKRILYNYEIDAPLNEKDERH LMMALLFHPNRDEKIGPGFQGIKVANSKHGNARCFEVVRTDGTTEDFSYHKCVLGATEII APTKVNFYKSKYLNPKPVKENPKTR NT seq 4398 nt NT seq  +upstreamnt  +downstreamnt atggaagaagattccgaggagcttcaggtgcccatcgccactctaaaatccataggtttt agtatttcgaaggatgaagatagagtgaaaatggcggctttcatggaggttgaagcaccg aaccaagtcagtgattcccggttagggctccctaatccggatgggatttgcagagcatgt ggcagcaaagatagaaaaacttgtgaagggcatttcggggttattaagtttcagtattcg gtaattaacccttatttcctcaaggagatagctgcattgcttaacagattctgccctggc tgtaaaaacattcgcaagaagcagtctcagagtattgaagaccggattgagagatgtaga tactgcacttcaaatacaggttaccctctaatgaagtttagggtaactactaaagaagtc ttcaggcgatccgggattgtctgtgaagtaagtgaagacaatctcttgaaactgaagaaa cgaggagtcttaacattacctcgtgattattgggattttgtgcgtaaagactccaacatc gacgaaagcagtttgaaaccagccaggcggattctaacgcatgcacaggtttatggtctg ttgtgtgggattgatgagaggctcatcaggaaggacattccaatgtttgactctctttct ctaacatctattccggttccaccaaatggttaccgtataaccgagttagttaaccagttc actggaccgaaactaatttttgatgaacgtactcggatctacaagaaattagttggcttc gaaggaaatttgcttgagttgagttctcgtgtgatcgaatgcatgcaatactccagactc ttttctgaaaatgtgtcttcgagtcaagaatccgcaaatccttaccagaagaagtcagat acaccgaagttgtgtggtctaaggttcatgaaagatgttcttcttggtaaaagaagcgac catacattcagaacagttgttgttggtgacccttctttgaagcttaacgagattggtata ccgaggaggatcgcagagaggcttcaagtaacagagaatctcaacaactggaacagagaa cgtctcgtcacttcctgtttccacaaactgctgctcgagaaaggagaggtttatgtaaga agaggagatagcttagtggctatcagagaaatcgatgacctacaaaccggagacaacatt ttccggacattaagagatggagacacggtgttgatgaacagacctccttcgattcatcag cactcgcttgtcgctatgtcggttagagtcctcccgaccacttctgttgtctccttgaac ccgatcatctgtttgccgtttcgtggtgactttgatggagactgtcttcacggttacgtt cctcagtctgttcaagccaaggttgagctcgatgagcttgtggctttggataagcagttt gttaacaggcagaatggtcgtaacttgctttctttaggacaggacagcttgactgcagct tatcttgttaatgtcgagaagaactgttttctgaaccgagctcagattcagcagctgcaa atgtactgtccctttcagcttcctccgcctgcgatcatccgagcttcttcttcttctttg agcagcagagaggagcctcaatggaccggaatgcagttgtttgggatgcttttccctccc gggtttgattacagttaccctctgaacaatgtggttgtaagcaacggagagcttttgtct tcctctgaaggctctgcttggttacgtgatggagaaggtaacttcatccagggtttgctc aagcacgacaaagggaaagtgcttgatatcatttactccgctcaagaaatgctctctgag tggttgctgatgcgtggacttagtgtgtccttggctgatttgtacttctcctctgactct cagtctcggagaaacttgacagatgagataacatacggtttgcaggaagctgaacaagtc tgcaacaagcaacagcttatggtcgagtcccgtagaggttttcttgcggttaacggagaa gaagaggaggaggaagatttgactgctgatttggcacggttctgcgtcgagagacagaga tcagcgacgctaagtaaacttgcagtgagtgctttcaaggacgcttatagagatgttcaa gcattggcttataggtacggtgatcaatcaaattcattcttgatcatgtcaaaagctgga agcaaaggaaacatagggaagctggttcagcacagcatgtgcattggtctgcagaattct tcggttgcgttgtccttcgggtttccacgtaagctgacttgtgctgcttggaacgacccg accagtccgcttcgtggtgcaaagggagaagacaaaaccgcttctgagtcctttgtccct tatggagtcatcgagaactcgtttctaacgggtctgaatccgttggagtcttttgtgcat tcagtgacaagccgtgatagctccttcagtggtaatgctgatctcccggggacacttagc agaaagttgatgttctttatgcgtgacatatacgctgcttatgacgggacagtgagaaac tcgttcggcaatcacttagtacagttttcttatgagactgatagtcctgtagaagaaata gccggcgaagcagtagggtcactttctgcctgtgctctcactgaagctgcttacagtgct ctagaccaacccattagccttcttgaaacttctccgcttctgaatcttaagaatgtgtta gagtgtggatcgaagaaaggtcaacgagaacagacaatgtctctctatttgtctgaaaca ctatctaagaagaagcacgggttcgaatatgggtcactggacatcaagaaccacttggag aaactgagtttctcagagatcgtttcgacatccatgataatattctctccgaggaaattc accaggatacctttgagcccatgggttctccattttcatatctccaagaaagcaatgaag cagaaacaactgaacgccgaatctgttgtctcttcgttaaacaagcagtatacgagcagg aagaacgaactgaagcttgatctaactgatttacaaatacaaagcacaaaccactgctct tgggatgataaggcaatggatgatgatagattctgcatcacagttaccgttgtggaagcc tcccatttttcttctttggaacttgatgctattagacttgtcttgatcccttttcttctc gactctcctgtcaaaggctaccgtgagattaaaagagtggatattttatgggctgatcga ccaaaagctcccaaaaggaacgtgaattctttgcccggtgagcttttcttgaaggttact atgtatggagatggaggcaagaagaacttttggagtgctcttcttgaaacctgtcttcct gttatggatgtgatcgattggactcgaagccatcctgataatatccgtcaatgctgctca gtgtatggaatagacgctggacgaagcattttcctagcaaatttggagtctgcggtgtct gatactggtaagacgatactacgtgaacatctgcttcttgtagctgattgtctctctgtt actggagagtttgtggcattaaactccaaaggttggggtaaacaaagacaggtcgagtcc actcctgcaccttttactcaagcatgcttctcgagcccaagtcaatgctttctcaaagct gctaaggaaggtgtcagagatgagcttcaaggatctatcgacgcattagcttggggaaaa gttccttgttttgggactggagatcaattcgaaatcatcatttctccaaagaatcatggg tttagtacacccgtagatgtgtttgactttctgagtagtacagcgacacttccaaagaca gggaaggtgcgtgcaacaaactccatgcctaaatcagacaaagtcacggtccagccattc cctttgctcgataacgctatctccaaagcaatcaatacactcgatgggaaaggactcgcc atgtcgcagctcagaaatatcttaacatgggacggcatcgaaaagctttctcgatcactc aaacgaatactttacaattacgagatcgatgctccgttgaatgagaaggatgagagacat ttgatgatggctctactcttccaccccaatagagatgagaaaattggaccaggcttccaa ggaattaaggtggctaattctaaacatgggaatgctcgttgcttcgaggttgtaagaaca gatggaacaacagaagatttctcttaccacaagtgtgtattgggagcaacagagatcatt gcccctacgaaagtgaacttctacaagtccaagtatctaaacccgaaacccgttaaagaa aacccgaaaacccgttga

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