Eutrema salsugineum (saltwater cress): EUTSA_v10023239mg
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Entry
EUTSA_v10023239mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
EUTSA_v10023239mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10023239mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
EUTSA_v10023239mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
18010235
NCBI-ProteinID:
XP_006392535
UniProt:
V4MEW3
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MGVPAFYRWLADRYPKSISDVVEEEPTDAGRDLIPVDITRPNPNGFEFDNLYLDMNGIIH
PCFHPEGKPTPATYDDVFKSMFEYIDHLFTLVRPRKVLYLAIDGVAPRAKMNQQRSRRFR
AAKDAAEAEAEEERLRQEFETGGQILSAKEKAETSDSNVITPGTQFMTILSVALQYYVQY
RLNHNPGWKFLKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLS
LATHEVHFSILREVITYPGQQEKCFVCGQTGHFAADCPGKSGSANAASDIPIHKKKYQFL
NIWVLREYLQYELAIPDTPFTINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLLM
HVYRKEFTAMGGYLTDSGEVLLNRVEHFIQAVAVNEDKIFQKRTRIKQSMDNNEEMKQRS
RRDPSEAPPEPIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDLVQKYVEGLCWVCR
YYYQGVCSWQWFYPYHYAPFASDLKNLSDLEITFFIGEPFKPFDQLMGTLPAASSNALPG
EYRKLMTDPSSPILKFYPADFEIDMNGKRFSWQGIAKLPFIEEKLLLAATRKLEETLTVE
ERQRNSVMLDLLYVHPAHPLGQRVMQYYQFYRQLAPHECLPWMIDPNSSQAMNGFLWFSE
RNGFQTKVVSPVNDLPSIEQNRALNVTYLNPAKHSHIPEPPRGAIIPDKILTSADIKPFP
PLWHEDNSNRRRQARDRPQVAGAIAGPMLGEAAHRLIKNTLNMKSSSGSASGLLDPYAYN
RNVPGNHYYGGVNRPRAPGSSSYRKAYEDDSSYYYYGKYNNSYQGTYSNGPRYPGPLNGS
PDYNQNYNNSKVEQQNRGGIRAGMSGLSIEDNVRSKQLYSSYTEAANASLKPLPLPPTQW
IGTPQGGNYGGGYYKEGVGYGETNGKPGKKVIYQAKTQQSRRGTNE
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgggggtaccagcgttctacagatggctcgctgaccggtacccgaagtctattagcgac
gtcgttgaggaagaacccaccgatgcaggtcgtgacctaattccggtagacatcaccaga
cctaaccctaacggcttcgaatttgataatctatacctcgatatgaacggtatcatccac
ccgtgtttccatcctgaaggaaagcctactcctgccacatatgatgatgtattcaaatct
atgtttgagtacattgaccatctttttacattagtgcgaccgaggaaggttctttatttg
gctatagatggagttgcacccagagcaaagatgaatcagcagcgttctcgacgttttaga
gctgcaaaggacgcagcggaggctgaagctgaggaagagaggttgagacaagagtttgag
actggggggcaaatcttgtctgctaaagagaaagcagaaacctcagattcaaatgtcatt
actcctgggacccagtttatgactatactgtccgtagctcttcagtattacgtccaatat
aggttaaaccataaccctggttggaaatttcttaaggtaattctttctgattcaaatgtg
ccgggcgaaggagaacacaagataatgtcatacattcgtctccaacgtaatcttcctggt
tttgatccaaatacacggcattgtctttatggtctggatgctgatttaataatgctatct
ctagcgacacatgaagttcacttttcaatcttaagagaggttatcacataccctggccaa
caagagaaatgttttgtgtgcggacaaactggtcattttgctgcagattgccctggaaaa
tcaggtagcgcaaatgcagcatctgatattccaatccacaagaaaaaatatcagttcctg
aacatctgggtgttgcgagaatatctgcaatatgaattggccattccagatactccgttc
acgatcaacttcgagagaattatagacgactttgttttcctttgcttctttgttggcaat
gacttcctacctcatatgcctacattggaaattcgagagggggctataaacttgctgatg
catgtttacagaaaggagtttacagctatgggaggctatctaacagattctggtgaggtt
ttgctaaatagggtagagcattttattcaagccgtcgctgttaatgaagataaaatattt
cagaaaaggacgcggataaaacagtcaatggacaacaatgaagaaatgaaacaaagatca
agaagagacccatctgaggcaccacctgaaccgatagacgataagattaagctaggagag
ccaggctacaaggaaaggtattatgctgagaaatttagtacgaccaatccagaggaaact
gagcaaatcaagcaagatctggtacaaaaatatgttgaaggtttgtgctgggtctgccgg
tactactaccaaggtgtttgctcttggcaatggttttacccataccattatgctccattt
gcttcagatcttaagaatctatctgatttggaaatcacatttttcattggagagcccttt
aaaccttttgaccagttaatgggaaccttgccggctgcaagctcaaatgctctacctggt
gaataccggaagttgatgactgatccctcatccccgatcctgaaattttaccctgctgat
tttgagattgacatgaatggaaagcgcttctcctggcagggtattgcaaaactccctttc
attgaggagaaattattgttagctgctacaaggaagcttgaagaaacgctaacggtggaa
gaacggcaacgcaacagcgtgatgcttgatttgttatacgtacaccccgctcatccactg
ggccagcgggttatgcagtactaccagttctaccgccagttggcaccacatgaatgtctt
ccatggatgattgacccgaattcgagccaagcgatgaacgggtttctctggtttagtgaa
aggaatggtttccaaacgaaagtggtttctcctgtaaatgatttgccaagcattgagcag
aaccgagccttaaatgttacgtacttgaatcctgccaaacactctcatatcccagaacca
ccaagaggagcgatcattccggacaagatcttgacgtcagcagatataaagccatttcct
cctttgtggcatgaagataatagcaaccgacgccgacaagcccgagatcgaccacaagtg
gctggtgctatagccggaccaatgctgggagaagcagctcatcgtcttatcaaaaacacg
cttaacatgaaatcctctagtggttcggcttcaggactacttgacccgtacgcatacaac
cgaaatgtaccgggtaatcattattacggtggagtcaatagaccaagagcaccaggttct
tcttcttacaggaaagcatacgaggatgactccagctattactattacggaaagtataac
aatagttaccaaggaacgtacagcaacggtccaaggtatcctggtccactaaatggatca
ccagactataaccagaactacaataattccaaggtagaacagcagaaccgtggtggaatc
agagctggaatgtcaggtttatctattgaagataacgtcagaagcaaacaattgtattca
agttatacagaagctgctaatgcaagtctcaaaccattgcctttaccgcctacccaatgg
atcggtacaccgcaaggtgggaattatggcggtggatactataaagaaggagttggttat
ggtgaaacaaatggaaaaccgggaaagaaagtgatttatcaggccaagacacaacaaagt
cgtcgaggcacaaatgaatga
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