KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10023239mg
Entry
EUTSA_v10023239mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:eus00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    EUTSA_v10023239mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10023239mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     EUTSA_v10023239mg
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC zf-CCHC_2
Other DBs
NCBI-GeneID: 18010235
NCBI-ProteinID: XP_006392535
UniProt: V4MEW3
LinkDB
Position
Unknown
AA seq 946 aa
MGVPAFYRWLADRYPKSISDVVEEEPTDAGRDLIPVDITRPNPNGFEFDNLYLDMNGIIH
PCFHPEGKPTPATYDDVFKSMFEYIDHLFTLVRPRKVLYLAIDGVAPRAKMNQQRSRRFR
AAKDAAEAEAEEERLRQEFETGGQILSAKEKAETSDSNVITPGTQFMTILSVALQYYVQY
RLNHNPGWKFLKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLS
LATHEVHFSILREVITYPGQQEKCFVCGQTGHFAADCPGKSGSANAASDIPIHKKKYQFL
NIWVLREYLQYELAIPDTPFTINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLLM
HVYRKEFTAMGGYLTDSGEVLLNRVEHFIQAVAVNEDKIFQKRTRIKQSMDNNEEMKQRS
RRDPSEAPPEPIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDLVQKYVEGLCWVCR
YYYQGVCSWQWFYPYHYAPFASDLKNLSDLEITFFIGEPFKPFDQLMGTLPAASSNALPG
EYRKLMTDPSSPILKFYPADFEIDMNGKRFSWQGIAKLPFIEEKLLLAATRKLEETLTVE
ERQRNSVMLDLLYVHPAHPLGQRVMQYYQFYRQLAPHECLPWMIDPNSSQAMNGFLWFSE
RNGFQTKVVSPVNDLPSIEQNRALNVTYLNPAKHSHIPEPPRGAIIPDKILTSADIKPFP
PLWHEDNSNRRRQARDRPQVAGAIAGPMLGEAAHRLIKNTLNMKSSSGSASGLLDPYAYN
RNVPGNHYYGGVNRPRAPGSSSYRKAYEDDSSYYYYGKYNNSYQGTYSNGPRYPGPLNGS
PDYNQNYNNSKVEQQNRGGIRAGMSGLSIEDNVRSKQLYSSYTEAANASLKPLPLPPTQW
IGTPQGGNYGGGYYKEGVGYGETNGKPGKKVIYQAKTQQSRRGTNE
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgggggtaccagcgttctacagatggctcgctgaccggtacccgaagtctattagcgac
gtcgttgaggaagaacccaccgatgcaggtcgtgacctaattccggtagacatcaccaga
cctaaccctaacggcttcgaatttgataatctatacctcgatatgaacggtatcatccac
ccgtgtttccatcctgaaggaaagcctactcctgccacatatgatgatgtattcaaatct
atgtttgagtacattgaccatctttttacattagtgcgaccgaggaaggttctttatttg
gctatagatggagttgcacccagagcaaagatgaatcagcagcgttctcgacgttttaga
gctgcaaaggacgcagcggaggctgaagctgaggaagagaggttgagacaagagtttgag
actggggggcaaatcttgtctgctaaagagaaagcagaaacctcagattcaaatgtcatt
actcctgggacccagtttatgactatactgtccgtagctcttcagtattacgtccaatat
aggttaaaccataaccctggttggaaatttcttaaggtaattctttctgattcaaatgtg
ccgggcgaaggagaacacaagataatgtcatacattcgtctccaacgtaatcttcctggt
tttgatccaaatacacggcattgtctttatggtctggatgctgatttaataatgctatct
ctagcgacacatgaagttcacttttcaatcttaagagaggttatcacataccctggccaa
caagagaaatgttttgtgtgcggacaaactggtcattttgctgcagattgccctggaaaa
tcaggtagcgcaaatgcagcatctgatattccaatccacaagaaaaaatatcagttcctg
aacatctgggtgttgcgagaatatctgcaatatgaattggccattccagatactccgttc
acgatcaacttcgagagaattatagacgactttgttttcctttgcttctttgttggcaat
gacttcctacctcatatgcctacattggaaattcgagagggggctataaacttgctgatg
catgtttacagaaaggagtttacagctatgggaggctatctaacagattctggtgaggtt
ttgctaaatagggtagagcattttattcaagccgtcgctgttaatgaagataaaatattt
cagaaaaggacgcggataaaacagtcaatggacaacaatgaagaaatgaaacaaagatca
agaagagacccatctgaggcaccacctgaaccgatagacgataagattaagctaggagag
ccaggctacaaggaaaggtattatgctgagaaatttagtacgaccaatccagaggaaact
gagcaaatcaagcaagatctggtacaaaaatatgttgaaggtttgtgctgggtctgccgg
tactactaccaaggtgtttgctcttggcaatggttttacccataccattatgctccattt
gcttcagatcttaagaatctatctgatttggaaatcacatttttcattggagagcccttt
aaaccttttgaccagttaatgggaaccttgccggctgcaagctcaaatgctctacctggt
gaataccggaagttgatgactgatccctcatccccgatcctgaaattttaccctgctgat
tttgagattgacatgaatggaaagcgcttctcctggcagggtattgcaaaactccctttc
attgaggagaaattattgttagctgctacaaggaagcttgaagaaacgctaacggtggaa
gaacggcaacgcaacagcgtgatgcttgatttgttatacgtacaccccgctcatccactg
ggccagcgggttatgcagtactaccagttctaccgccagttggcaccacatgaatgtctt
ccatggatgattgacccgaattcgagccaagcgatgaacgggtttctctggtttagtgaa
aggaatggtttccaaacgaaagtggtttctcctgtaaatgatttgccaagcattgagcag
aaccgagccttaaatgttacgtacttgaatcctgccaaacactctcatatcccagaacca
ccaagaggagcgatcattccggacaagatcttgacgtcagcagatataaagccatttcct
cctttgtggcatgaagataatagcaaccgacgccgacaagcccgagatcgaccacaagtg
gctggtgctatagccggaccaatgctgggagaagcagctcatcgtcttatcaaaaacacg
cttaacatgaaatcctctagtggttcggcttcaggactacttgacccgtacgcatacaac
cgaaatgtaccgggtaatcattattacggtggagtcaatagaccaagagcaccaggttct
tcttcttacaggaaagcatacgaggatgactccagctattactattacggaaagtataac
aatagttaccaaggaacgtacagcaacggtccaaggtatcctggtccactaaatggatca
ccagactataaccagaactacaataattccaaggtagaacagcagaaccgtggtggaatc
agagctggaatgtcaggtttatctattgaagataacgtcagaagcaaacaattgtattca
agttatacagaagctgctaatgcaagtctcaaaccattgcctttaccgcctacccaatgg
atcggtacaccgcaaggtgggaattatggcggtggatactataaagaaggagttggttat
ggtgaaacaaatggaaaaccgggaaagaaagtgatttatcaggccaagacacaacaaagt
cgtcgaggcacaaatgaatga

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